Variant report

Variant	nsv892000
Chromosome Location	chr9:678951-972476
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3791)
CpG islands
(count:2082)
Chromatin interactive
region (count:140)
LncRNA
region (count:19)
Mature miRNA
region (count: 0)
miRNA target
sites (count:5)

(count:3791 , 50 per page) page: 1 2 3 4 5 6 7 ... 76

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:734845-735045	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:792615-792973	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:755679-756377	HepG2	liver:	n/a	n/a
4	ARID3A	chr9:685087-685396	HepG2	liver:	n/a	n/a
5	ARID3A	chr9:710020-710338	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:696723-696891	HepG2	liver:	n/a	n/a
7	ARID3A	chr9:706757-707182	HepG2	liver:	n/a	chr9:706927-706943
8	ARID3A	chr9:682346-683925	HepG2	liver:	n/a	n/a
9	ARID3A	chr9:764021-764430	HepG2	liver:	n/a	n/a
10	ARID3A	chr9:745817-746038	HepG2	liver:	n/a	n/a
11	ARID3A	chr9:706038-706477	HepG2	liver:	n/a	n/a
12	ARID3A	chr9:716213-716255	HepG2	liver:	n/a	n/a
13	ARID3A	chr9:744770-744894	HepG2	liver:	n/a	n/a
14	ARID3A	chr9:726050-726236	HepG2	liver:	n/a	n/a
15	ATF2	chr9:859161-859692	GM12878	blood:	n/a	n/a
16	ATF2	chr9:893794-894511	GM12878	blood:	n/a	n/a
17	ATF2	chr9:880645-881171	GM12878	blood:	n/a	n/a
18	ATF2	chr9:859288-859680	GM12878	blood:	n/a	n/a
19	ATF2	chr9:880676-881163	GM12878	blood:	n/a	n/a
20	ATF2	chr9:893752-894467	GM12878	blood:	n/a	n/a
21	ATF2	chr9:840342-840725	H1-hESC	embryonic stem cell:	n/a	n/a
22	BACH1	chr9:908830-909208	H1-hESC	embryonic stem cell:	n/a	n/a
23	BACH1	chr9:919938-919953	K562	blood:	n/a	n/a
24	BACH1	chr9:706737-707111	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr9:801698-801802	H1-hESC	embryonic stem cell:	n/a	chr9:801716-801730
26	BACH1	chr9:969420-970114	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr9:972119-972583	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr9:971586-971900	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr9:971010-971040	H1-hESC	embryonic stem cell:	n/a	n/a
30	BACH1	chr9:841437-841715	H1-hESC	embryonic stem cell:	n/a	n/a
31	BATF	chr9:755733-756053	GM12878	blood:	n/a	chr9:755945-755954 chr9:755850-755861
32	BATF	chr9:893858-894326	GM12878	blood:	n/a	n/a
33	BATF	chr9:847470-847844	GM12878	blood:	n/a	n/a
34	BATF	chr9:755709-756109	GM12878	blood:	n/a	chr9:755945-755954 chr9:755850-755861
35	BATF	chr9:903869-904086	GM12878	blood:	n/a	n/a
36	BATF	chr9:847504-847840	GM12878	blood:	n/a	n/a
37	BATF	chr9:800791-801012	GM12878	blood:	n/a	n/a
38	BATF	chr9:808690-808887	GM12878	blood:	n/a	n/a
39	BATF	chr9:893792-894397	GM12878	blood:	n/a	n/a
40	BCL11A	chr9:893880-894376	GM12878	blood:	n/a	n/a
41	BCL11A	chr9:880773-881159	GM12878	blood:	n/a	n/a
42	BCL11A	chr9:880682-881185	GM12878	blood:	n/a	n/a
43	BCL11A	chr9:893909-894335	GM12878	blood:	n/a	n/a
44	BCL11A	chr9:840410-840568	H1-hESC	embryonic stem cell:	n/a	n/a
45	BCL11A	chr9:899799-900118	GM12878	blood:	n/a	n/a
46	BCL11A	chr9:808677-809119	GM12878	blood:	n/a	n/a
47	BCL11A	chr9:903913-904168	GM12878	blood:	n/a	n/a
48	BCL11A	chr9:899392-899596	H1-hESC	embryonic stem cell:	n/a	n/a
49	BCL11A	chr9:859287-859598	GM12878	blood:	n/a	n/a
50	BCL11A	chr9:859277-859643	GM12878	blood:	n/a	n/a

(count:2082 , 50 per page) page: 1 2 3 4 5 6 7 ... 42

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:714269-714319	HAEpiC	amniotic membrane:	n/a
2	chr9:843179-843229	NHBE	bronchial:	n/a
3	chr9:839126-839176	MCF10A-Er-Src	breast:	n/a
4	chr9:705143-705193	HRPEpiC	eye:	n/a
5	chr9:845427-845477	A549	lung:	n/a
6	chr9:842799-842849	HIPEpiC	eye:	n/a
7	chr9:970882-970932	AG04449	skin:	fetal
8	chr9:842799-842849	Hepatocyte	liver:	n/a
9	chr9:714269-714319	HAEpiC	amniotic membrane:	n/a
10	chr9:843179-843229	NHBE	bronchial:	n/a
11	chr9:839126-839176	MCF10A-Er-Src	breast:	n/a
12	chr9:705143-705193	HRPEpiC	eye:	n/a
13	chr9:845427-845477	A549	lung:	n/a
14	chr9:842799-842849	HIPEpiC	eye:	n/a
15	chr9:970882-970932	AG04449	skin:	fetal
16	chr9:842799-842849	Hepatocyte	liver:	n/a
17	chr9:968090-968140	GM12892	blood:	n/a
18	chr9:857563-857613	T-47D	breast:	n/a
19	chr9:970654-970704	HEK293	kidney:	embryo
20	chr9:971046-971096	SK-N-SH_RA	brain:	n/a
21	chr9:968090-968140	Jurkat	blood:	n/a
22	chr9:969530-969580	HL-60	blood:	n/a
23	chr9:969544-969594	MCF-7	breast:	n/a
24	chr9:842914-842964	BJ	skin:	n/a
25	chr9:841632-841682	A549	lung:	n/a
26	chr9:970605-970655	HRCEpiC	kidney:	n/a
27	chr9:971757-971807	IMR90	lung:	fetal
28	chr9:842799-842849	AG09309	skin:	n/a
29	chr9:714269-714319	HEK293	kidney:	embryo
30	chr9:843179-843229	AG04450	lung:	fetal
31	chr9:857563-857613	HCPEpiC	choroid plexus:	n/a
32	chr9:970605-970655	LNCaP	prostate:	n/a
33	chr9:842799-842849	AG09319	gingival:	n/a
34	chr9:839126-839176	PrEC	prostate:	n/a
35	chr9:843179-843229	AG09319	gingival:	n/a
36	chr9:839557-839607	HEK293	kidney:	embryo
37	chr9:707166-707216	BJ	skin:	n/a
38	chr9:899635-899685	K562	blood:	n/a
39	chr9:843748-843798	AoSMC	blood vessel:	n/a
40	chr9:839557-839607	HL-60	blood:	n/a
41	chr9:971757-971807	HCT-116	colon:	n/a
42	chr9:707166-707216	NHBE	bronchial:	n/a
43	chr9:968090-968140	MCF10A-Er-Src	breast:	n/a
44	chr9:843748-843798	Jurkat	blood:	n/a
45	chr9:826657-826707	AoSMC	blood vessel:	n/a
46	chr9:899635-899685	AG09309	skin:	n/a
47	chr9:970297-970347	HCF	heart:	n/a
48	chr9:971046-971096	HEK293	kidney:	embryo
49	chr9:761482-761532	SK-N-MC	brain:	n/a
50	chr9:707410-707460	HAEpiC	amniotic membrane:	n/a

(count:140 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr9:945711..948034-chr9:954926..957736,2	MCF-7	breast:
2	chr16:1239384..1239884-chr9:736833..737597,2	MCF-7	breast:
3	chr9:581821..582545-chr9:807512..808214,2	MCF-7	breast:
4	chr9:757453..760203-chr9:763946..765702,2	MCF-7	breast:
5	chr9:953799..955412-chr9:960065..962028,2	MCF-7	breast:
6	chr9:945895..948429-chr9:952916..954422,2	MCF-7	breast:
7	chr9:962191..965396-chr9:970150..972525,3	MCF-7	breast:
8	chr9:721333..724004-chr9:738366..740594,2	MCF-7	breast:
9	chr9:873202..875175-chr9:876431..878577,2	K562	blood:
10	chr9:843269..845393-chr9:851272..854140,2	MCF-7	breast:
11	chr9:891442..893609-chr9:898111..900604,2	MCF-7	breast:
12	chr9:879492..881659-chr9:881684..884926,3	MCF-7	breast:
13	chr9:709767..712435-chr9:740415..742459,2	MCF-7	breast:
14	chr9:613518..614436-chr9:806263..806822,2	MCF-7	breast:
15	chr9:893739..894732-chr9:1008819..1009733,5	MCF-7	breast:
16	chr9:686763..689090-chr9:692801..694616,2	MCF-7	breast:
17	chr12:97384088..97385884-chr9:964414..966557,2	MCF-7	breast:
18	chr9:900039..901541-chr9:989164..991359,2	MCF-7	breast:
19	chr9:730043..732840-chr9:737557..739917,2	MCF-7	breast:
20	chr9:686763..689090-chr9:692801..694616,2	MCF-7	breast:
21	chr9:892827..894783-chr9:997829..1000001,46	MCF-7	breast:
22	chr9:698899..701683-chr9:703340..705392,2	MCF-7	breast:
23	chr9:763806..764607-chr9:806256..807153,5	MCF-7	breast:
24	chr9:710784..713169-chr9:756222..759004,2	MCF-7	breast:
25	chr9:581871..582698-chr9:763741..764739,5	MCF-7	breast:
26	chr9:923145..924947-chr9:928055..930388,2	MCF-7	breast:
27	chr9:962191..965396-chr9:970150..972525,3	MCF-7	breast:
28	chr9:347478..348338-chr9:806313..807172,2	MCF-7	breast:
29	chr9:958996..960730-chr9:1034832..1036725,2	MCF-7	breast:
30	chr9:910762..911411-chr9:998511..999239,3	MCF-7	breast:
31	chr9:852085..854136-chr9:910104..912950,2	K562	blood:
32	chr9:706377..708156-chr9:805249..808005,2	MCF-7	breast:
33	chr9:875320..878036-chr9:881518..883087,2	MCF-7	breast:
34	chr9:893937..894571-chr9:1000555..1001318,2	MCF-7	breast:
35	chr9:852085..854136-chr9:910104..912950,2	K562	blood:
36	chr9:613650..614569-chr9:806256..807252,7	MCF-7	breast:
37	chr9:613586..614504-chr9:756894..758172,6	MCF-7	breast:
38	chr9:680963..683890-chr9:685859..688092,2	MCF-7	breast:
39	chr9:950930..953777-chr9:967112..968787,2	MCF-7	breast:
40	chr9:879492..881659-chr9:881684..884926,3	MCF-7	breast:
41	chr9:782884..784766-chr9:785783..787661,2	MCF-7	breast:
42	chr9:889496..890427-chr9:998557..999062,2	MCF-7	breast:
43	chr9:707080..708925-chr9:715815..718212,3	MCF-7	breast:
44	chr9:801986..804534-chr9:805350..807829,2	MCF-7	breast:
45	chr9:682966..685572-chr9:709711..712587,2	MCF-7	breast:
46	chr9:829461..831177-chr9:832230..834782,2	MCF-7	breast:
47	chr9:581769..582694-chr9:763829..764743,4	MCF-7	breast:
48	chr9:950930..953777-chr9:967112..968787,2	MCF-7	breast:
49	chr9:968342..970313-chr9:973554..975096,2	K562	blood:
50	chr9:893804..894399-chr9:1008894..1009774,3	K562	blood:

(count:19 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C9orf66-4	chr9:747413-747469	XLOC_007628
2	lnc-C9orf66-3	chr9:685528-685555	ENSG00000227914.1
3	lnc-C9orf66-3	chr9:685528-685555	ENSG00000227914.3
4	lnc-DMRT3-3	chr9:959154-959514	uc_247_+
5	lnc-C9orf66-4	chr9:749336-749496	XLOC_007628
6	lnc-C9orf66-3	chr9:680857-681046	ENSG00000227914.1
7	lnc-C9orf66-9	chr9:959154-959514	uc_247_-
8	lnc-DMRT3-2	chr9:964189-964410	uc_248_+
9	lnc-C9orf66-10	chr9:964189-964410	uc_248_-
10	lnc-C9orf66-4	chr9:761299-761551	XLOC_007628
11	lnc-C9orf66-4	chr9:749336-749509	XLOC_007628
12	lnc-C9orf66-5	chr9:752722-752856	XLOC_007629
13	lnc-C9orf66-3	chr9:680857-681046	ENSG00000227914.3
14	lnc-KANK1-1	chr9:746431-746497	NONHSAT129937
15	lnc-C9orf66-4	chr9:747413-747469	XLOC_007628
16	lnc-KANK1-1	chr9:747272-747365	NONHSAT129937
17	lnc-KANK1-1	chr9:747412-747469	NONHSAT129937
18	lnc-C9orf66-5	chr9:755232-755507	XLOC_007629
19	lnc-KANK1-1	chr9:748000-751056	NONHSAT129937

No data

(count:5 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	KANK1	hsa-miR-124-3p	chr9:746043-746062
2	KANK1	hsa-miR-124-3p	chr9:746055-746062
3	KANK1	hsa-miR-10a-5p	chr9:745092-745115
4	KANK1	hsa-miR-335-5p	chr9:746085-746104
5	KANK1	hsa-miR-335-5p	chr9:746049-746071

Variant related genes	Relation type
ENSG00000227914	TF binding region
KANK1	TF binding region
DMRT3	TF binding region
DMRT1	TF binding region
ENSG00000227914	CpG island
KANK1	CpG island
DMRT3	CpG island
DMRT1	CpG island
ENSG00000064218	chromatin interactions
ENSG00000227914	chromatin interactions
ENSG00000108557	chromatin interactions
ENSG00000107104	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000252991	chromatin interactions
FAM123B	miRNA target sites
SOD2	miRNA target sites
PPM1A	miRNA target sites

Extended variants
information (count: 12335 )
Associated
traits (count: 118 )

Variant overlapped rSNPs/rCNVs (count:12335 , 50 per page) page: 1 2 3 4 5 6 7 ... 247

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10815463	chr9:678951-678952	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs139695149	chr9:678960-678961	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs144579070	chr9:678968-678969	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs368376720	chr9:678978-678979	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs186160643	chr9:679032-679033	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs541959555	chr9:679082-679083	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs147874250	chr9:679097-679098	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs9407356	chr9:679119-679120	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
9	rs569214346	chr9:679129-679130	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs191209088	chr9:679136-679137	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs182536146	chr9:679137-679138	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs577796761	chr9:679152-679153	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs367563564	chr9:679181-679182	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs540562651	chr9:679183-679184	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs4742227	chr9:679184-679185	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs572552183	chr9:679188-679189	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs376090870	chr9:679210-679211	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs79159672	chr9:679222-679223	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs16924629	chr9:679234-679235	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs554339428	chr9:679290-679291	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs534909849	chr9:679295-679296	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs74710818	chr9:679303-679304	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs371397024	chr9:679352-679353	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs564153237	chr9:679414-679415	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs533146050	chr9:679423-679424	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs546954629	chr9:679424-679425	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs566768869	chr9:679426-679427	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs200826192	chr9:679433-679434	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs549075432	chr9:679455-679456	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs145428550	chr9:679459-679460	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs186404832	chr9:679477-679478	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs551840115	chr9:679479-679480	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs190795515	chr9:679483-679484	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs113956992	chr9:679484-679485	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs554045067	chr9:679490-679491	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs573953174	chr9:679535-679536	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs4742229	chr9:679543-679544	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs376373580	chr9:679571-679572	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs183132087	chr9:679594-679595	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs117855914	chr9:679666-679667	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs544010889	chr9:679681-679682	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs1885925	chr9:679728-679729	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
43	rs187426442	chr9:679761-679762	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs118124950	chr9:679763-679764	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs570520265	chr9:679764-679765	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs529174394	chr9:679815-679816	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs10975767	chr9:679831-679832	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs562780037	chr9:679850-679851	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs531725172	chr9:679859-679860	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs1885924	chr9:679901-679902	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:118)

Disease	PMID	Source
Cancer	20164920	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Myelofibrosis	22110671	CNVD
Lynch syndrome	18415027	CNVD
Retinoblastoma	21504564	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	22286061	CNVD
Williams-beuren syndrome	18553513	CNVD
Disorders of sex development	21048976	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
prenatal diagnosis	20453657	CNVD
Gastric cancer	16715143	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Autism	20531469	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Developmental delay	20808231	CNVD
Obesity	20808231	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-small cell lung cancer	16651412	CNVD
Cancer	21272361	CNVD
Schizophrenia	20967226	CNVD
T-cell lymphomas	22341440	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Ependymoma	20639864	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Ovarian cancer	21781307	CNVD
Amyotrophic lateral sclerosis	20685689	CNVD

Chromatin state (count:5265 , 50 per page) page: 1 2 3 4 5 6 7 ... 106

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:653400-698000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr9:670800-706800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr9:674400-682800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr9:674400-682800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr9:674400-693200	Weak transcription	Primary T cells from cord blood	blood
6	chr9:674600-683200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr9:676400-683000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr9:676600-679000	Enhancers	Fetal Intestine Large	intestine
9	chr9:677000-682800	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr9:677200-682400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr9:677400-682600	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr9:677400-682800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr9:677600-682600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
14	chr9:677600-682600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
15	chr9:677600-683000	Weak transcription	H1 Cell Line	embryonic stem cell
16	chr9:677800-679000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr9:677800-679200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr9:677800-689400	Weak transcription	Fetal Muscle Trunk	muscle
19	chr9:678000-679200	Enhancers	NHEK	skin
20	chr9:678000-680000	Weak transcription	Cortex derived primary cultured neurospheres	brain
21	chr9:678000-680000	Weak transcription	Left Ventricle	heart
22	chr9:678000-680200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
23	chr9:678000-680600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr9:678000-682800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr9:678000-682800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr9:678000-682800	Weak transcription	HUES64 Cell Line	embryonic stem cell
27	chr9:678000-682800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr9:678000-682800	Weak transcription	Esophagus	oesophagus
29	chr9:678000-682800	Weak transcription	Fetal Lung	lung
30	chr9:678000-682800	Weak transcription	Rectal Mucosa Donor 31	rectum
31	chr9:678000-682800	Weak transcription	Right Atrium	heart
32	chr9:678000-682800	Weak transcription	Right Ventricle	heart
33	chr9:678000-683000	Weak transcription	Brain Angular Gyrus	brain
34	chr9:678000-683000	Weak transcription	HSMM	muscle
35	chr9:678000-684000	Weak transcription	Fetal Muscle Leg	muscle
36	chr9:678000-684000	Weak transcription	Pancreas	Pancrea
37	chr9:678000-684000	Weak transcription	Psoas Muscle	Psoas
38	chr9:678000-688000	Weak transcription	Gastric	stomach
39	chr9:678000-695200	Weak transcription	Colonic Mucosa	Colon
40	chr9:678200-679000	Enhancers	Liver	Liver
41	chr9:678200-679000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
42	chr9:678200-679000	Enhancers	Brain Substantia Nigra	brain
43	chr9:678200-679400	Enhancers	HMEC	breast
44	chr9:678200-680000	Weak transcription	NH-A	brain
45	chr9:678200-680200	Enhancers	Breast Myoepithelial Primary Cells	Breast
46	chr9:678200-680600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
47	chr9:678200-682600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr9:678200-682600	Weak transcription	Duodenum Mucosa	Duodenum
49	chr9:678200-682600	Weak transcription	Stomach Mucosa	stomach
50	chr9:678200-682800	Weak transcription	Sigmoid Colon	Sigmoid Colon

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