Variant report

Variant	nsv892628
Chromosome Location	chr9:15420805-15528290
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2877)
CpG islands
(count:1344)
Chromatin interactive
region (count:78)
LncRNA
region (count:15)
Mature miRNA
region (count: 0)
miRNA target
sites (count:6)

(count:2877 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:15422587-15422682	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:15426284-15426484	K562	blood:	n/a	n/a
3	ARID3A	chr9:15423509-15423900	K562	blood:	n/a	n/a
4	ARID3A	chr9:15510964-15511424	K562	blood:	n/a	n/a
5	ARID3A	chr9:15422654-15422834	K562	blood:	n/a	n/a
6	ARID3A	chr9:15479957-15480401	HepG2	liver:	n/a	n/a
7	ARID3A	chr9:15423654-15424033	HepG2	liver:	n/a	n/a
8	ATF1	chr9:15510864-15511555	K562	blood:	n/a	n/a
9	ATF2	chr9:15461752-15462226	GM12878	blood:	n/a	n/a
10	ATF2	chr9:15475829-15476605	GM12878	blood:	n/a	n/a
11	ATF2	chr9:15425980-15426551	GM12878	blood:	n/a	n/a
12	ATF2	chr9:15422425-15422861	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr9:15510476-15511627	GM12878	blood:	n/a	n/a
14	ATF2	chr9:15511041-15511502	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr9:15422346-15422848	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr9:15513099-15513786	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF2	chr9:15510945-15511509	H1-hESC	embryonic stem cell:	n/a	n/a
18	ATF2	chr9:15476058-15476577	GM12878	blood:	n/a	n/a
19	ATF2	chr9:15426044-15426358	GM12878	blood:	n/a	n/a
20	ATF2	chr9:15510877-15511546	GM12878	blood:	n/a	n/a
21	ATF2	chr9:15422403-15423034	GM12878	blood:	n/a	n/a
22	ATF3	chr9:15510742-15510991	K562	blood:	n/a	chr9:15510783-15510792
23	ATF3	chr9:15422610-15422838	K562	blood:	n/a	n/a
24	BACH1	chr9:15510100-15510268	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr9:15463172-15463358	H1-hESC	embryonic stem cell:	n/a	n/a
26	BATF	chr9:15476154-15476542	GM12878	blood:	n/a	n/a
27	BATF	chr9:15527023-15527263	GM12878	blood:	n/a	n/a
28	BATF	chr9:15426020-15426415	GM12878	blood:	n/a	n/a
29	BATF	chr9:15475961-15476536	GM12878	blood:	n/a	n/a
30	BATF	chr9:15426063-15426425	GM12878	blood:	n/a	n/a
31	BATF	chr9:15424848-15425076	GM12878	blood:	n/a	chr9:15424968-15424977
32	BATF	chr9:15510995-15511430	GM12878	blood:	n/a	chr9:15511159-15511168
33	BATF	chr9:15512217-15512549	GM12878	blood:	n/a	n/a
34	BATF	chr9:15512206-15512535	GM12878	blood:	n/a	n/a
35	BCL11A	chr9:15511025-15511499	GM12878	blood:	n/a	chr9:15511461-15511469
36	BCL11A	chr9:15422429-15422805	GM12878	blood:	n/a	chr9:15422614-15422627
37	BCL11A	chr9:15422513-15422747	GM12878	blood:	n/a	chr9:15422614-15422627
38	BCL11A	chr9:15476098-15476542	GM12878	blood:	n/a	n/a
39	BCL3	chr9:15461614-15461901	GM12878	blood:	n/a	n/a
40	BCL3	chr9:15476053-15476484	GM12878	blood:	n/a	n/a
41	BCL3	chr9:15460568-15461058	GM12878	blood:	n/a	n/a
42	BCL3	chr9:15510847-15511650	A549	lung:	n/a	chr9:15511461-15511469
43	BCL3	chr9:15459330-15459582	GM12878	blood:	n/a	n/a
44	BCL3	chr9:15510482-15511579	GM12878	blood:	n/a	chr9:15511461-15511469 chr9:15510697-15510710
45	BCL3	chr9:15422174-15423029	A549	lung:	n/a	chr9:15422414-15422423 chr9:15422614-15422627
46	BCLAF1	chr9:15422376-15423136	GM12878	blood:	n/a	chr9:15422414-15422423 chr9:15422614-15422627
47	BCLAF1	chr9:15510407-15511657	GM12878	blood:	n/a	chr9:15511461-15511469 chr9:15510697-15510710
48	BCLAF1	chr9:15422287-15423154	GM12878	blood:	n/a	chr9:15422414-15422423 chr9:15422614-15422627
49	BCLAF1	chr9:15476037-15476413	GM12878	blood:	n/a	n/a
50	BCLAF1	chr9:15425904-15426489	GM12878	blood:	n/a	n/a

(count:1344 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:15511358-15511408	GM06990	blood:	n/a
2	chr9:15422769-15422819	PrEC	prostate:	n/a
3	chr9:15511358-15511408	GM06990	blood:	n/a
4	chr9:15422769-15422819	PrEC	prostate:	n/a
5	chr9:15422993-15423043	HIPEpiC	eye:	n/a
6	chr9:15511358-15511408	HepG2	liver:	n/a
7	chr9:15422376-15422426	PrEC	prostate:	n/a
8	chr9:15423182-15423232	SK-N-SH	brain:	n/a
9	chr9:15510857-15510907	AG04450	lung:	fetal
10	chr9:15510857-15510907	SK-N-SH_RA	brain:	n/a
11	chr9:15442613-15442663	ovcar-3	ovarian:	n/a
12	chr9:15511094-15511144	ovcar-3	ovarian:	n/a
13	chr9:15510461-15510511	HRE	kidney:	n/a
14	chr9:15425935-15425985	HEEpiC	esophagus:	n/a
15	chr9:15422376-15422426	AG09319	gingival:	n/a
16	chr9:15510461-15510511	HIPEpiC	eye:	n/a
17	chr9:15442613-15442663	NH-A	brain:	n/a
18	chr9:15423618-15423668	HAEpiC	amniotic membrane:	n/a
19	chr9:15511094-15511144	GM12892	blood:	n/a
20	chr9:15422589-15422639	Caco-2	colon:	n/a
21	chr9:15422769-15422819	GM12892	blood:	n/a
22	chr9:15511231-15511281	HCT-116	colon:	n/a
23	chr9:15511503-15511553	RPTEC	kidney:	n/a
24	chr9:15510857-15510907	NT2-D1	testis:	n/a
25	chr9:15442613-15442663	LNCaP	prostate:	n/a
26	chr9:15509362-15509412	K562	blood:	n/a
27	chr9:15422943-15422993	HEEpiC	esophagus:	n/a
28	chr9:15423182-15423232	GM19239	blood:	n/a
29	chr9:15511358-15511408	HRCEpiC	kidney:	n/a
30	chr9:15511231-15511281	HNPCEpiC	eye:	n/a
31	chr9:15442613-15442663	NHBE	bronchial:	n/a
32	chr9:15422589-15422639	AG09309	skin:	n/a
33	chr9:15527817-15527867	CMK	blood:	n/a
34	chr9:15511220-15511270	ovcar-3	ovarian:	n/a
35	chr9:15527817-15527867	IMR90	lung:	fetal
36	chr9:15507365-15507415	AG04450	lung:	fetal
37	chr9:15442613-15442663	PrEC	prostate:	n/a
38	chr9:15511231-15511281	Jurkat	blood:	n/a
39	chr9:15422589-15422639	PANC-1	pancreas:	n/a
40	chr9:15527817-15527867	PrEC	prostate:	n/a
41	chr9:15511231-15511281	SK-N-MC	brain:	n/a
42	chr9:15423618-15423668	PANC-1	pancreas:	n/a
43	chr9:15510461-15510511	Hepatocyte	liver:	n/a
44	chr9:15423618-15423668	HNPCEpiC	eye:	n/a
45	chr9:15511358-15511408	BE2_C	brain:	n/a
46	chr9:15511503-15511553	CMK	blood:	n/a
47	chr9:15511231-15511281	NT2-D1	testis:	n/a
48	chr9:15422993-15423043	ovcar-3	ovarian:	n/a
49	chr9:15510857-15510907	GM12892	blood:	n/a
50	chr9:15422376-15422426	AG04450	lung:	fetal

(count:78 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr9:15509318..15512022-chr9:15550389..15555494,9	MCF-7	breast:
2	chr9:15450513..15453468-chr9:15464401..15466619,2	K562	blood:
3	chr9:15420090..15425077-chr9:15425243..15430966,9	MCF-7	breast:
4	chr9:15511224..15513667-chr9:15516724..15518268,2	K562	blood:
5	chr9:15422069..15423659-chr9:15430578..15433740,3	K562	blood:
6	chr11:71751691..71752198-chr9:15422276..15423243,2	HCT-116	colon:
7	chr9:15422994..15424695-chr9:15475354..15478030,2	K562	blood:
8	chr9:15510312..15513012-chr9:15513420..15514921,2	K562	blood:
9	chr9:15478298..15480267-chr9:15506894..15508631,2	K562	blood:
10	chr9:15352501..15354066-chr9:15419261..15422025,2	MCF-7	breast:
11	chr9:15459149..15461861-chr9:15462979..15465406,2	K562	blood:
12	chr9:15422138..15423750-chr9:15430824..15433204,2	K562	blood:
13	chr9:15510264..15513012-chr9:15513420..15518300,5	K562	blood:
14	chr9:15478298..15480267-chr9:15506894..15508631,2	K562	blood:
15	chr9:15478524..15480549-chr9:15486729..15489229,2	MCF-7	breast:
16	chr9:15505901..15508536-chr9:15509370..15512182,2	MCF-7	breast:
17	chr1:205782053..205782858-chr9:15422168..15422987,2	HCT-116	colon:
18	chr9:15466603..15468286-chr9:15468644..15471427,2	K562	blood:
19	chr9:15463673..15465886-chr9:15466740..15469405,2	K562	blood:
20	chr9:15421340..15424109-chr9:15510012..15511838,2	K562	blood:
21	chr9:15500921..15503434-chr9:15509057..15512249,3	MCF-7	breast:
22	chr9:15452841..15455105-chr9:15460969..15462549,2	MCF-7	breast:
23	chr2:173940670..173941204-chr9:15422600..15423282,2	Hela-S3	cervix:
24	chr9:15512114..15513693-chr9:15523609..15526046,2	MCF-7	breast:
25	chr3:148847380..148847959-chr9:15510544..15511291,2	NB4	blood:
26	chr12:7052754..7053671-chr9:15422600..15423100,2	Hela-S3	cervix:
27	chr9:15420915..15423147-chr9:15426389..15428949,2	K562	blood:
28	chr9:15306135..15309581-chr9:15420818..15425516,6	MCF-7	breast:
29	chr9:15512114..15513693-chr9:15523609..15526046,2	MCF-7	breast:
30	chr9:15485567..15487511-chr9:15490799..15493876,3	K562	blood:
31	chr9:15493173..15497838-chr9:15508681..15511905,4	K562	blood:
32	chr9:15478524..15480549-chr9:15486729..15489229,2	MCF-7	breast:
33	chr9:15465896..15468103-chr9:15469052..15471427,2	K562	blood:
34	chr9:15500423..15502861-chr9:15505705..15507539,3	K562	blood:
35	chr9:15460438..15462914-chr9:15467328..15469967,2	K562	blood:
36	chr2:217363452..217364033-chr9:15422219..15422852,2	HCT-116	colon:
37	chr9:15469088..15470656-chr9:15499261..15501124,2	K562	blood:
38	chr9:15510875..15512396-chr9:15551516..15553319,2	MCF-7	breast:
39	chr9:15494263..15496917-chr9:15497648..15499315,2	K562	blood:
40	chr9:15511224..15513667-chr9:15516724..15518268,2	K562	blood:
41	chr9:15499825..15503546-chr9:15507865..15511009,5	MCF-7	breast:
42	chr9:15485567..15487511-chr9:15490799..15493876,3	K562	blood:
43	chr9:15460438..15462914-chr9:15467328..15469967,2	K562	blood:
44	chr9:15500423..15502268-chr9:15505705..15507482,2	K562	blood:
45	chr9:15500423..15502268-chr9:15505705..15507482,2	K562	blood:
46	chr9:15494263..15496917-chr9:15497648..15499315,2	K562	blood:
47	chr9:15507256..15510187-chr9:15510704..15514473,5	K562	blood:
48	chr9:15420595..15424773-chr9:15424796..15433036,11	MCF-7	breast:
49	chr9:15484045..15486584-chr9:15552242..15553964,2	MCF-7	breast:
50	chr9:15465896..15468103-chr9:15469052..15471427,2	K562	blood:

(count:15 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PSIP1-1	chr9:15462224-15462521	expReg_chr9_993_-
2	lnc-TTC39B-5	chr9:15489268-15489438	NONHSAT130267
3	lnc-TTC39B-5	chr9:15510115-15510327	NONHSAT130269
4	lnc-C9orf93-5	chr9:15454152-15454489	predAs_ge08_PSIP1_1
5	lnc-TTC39B-5	chr9:15491950-15492223	NONHSAT130268
6	lnc-TTC39B-5	chr9:15504957-15506635	NONHSAT130269
7	lnc-TTC39B-5	chr9:15506559-15506635	NONHSAT130267
8	lnc-PSIP1-2	chr9:15525782-15526079	NONHSAT130270
9	lnc-TTC39B-5	chr9:15489984-15490122	NONHSAT130267
10	lnc-TTC39B-5	chr9:15510815-15510989	NONHSAT130268
11	lnc-TTC39B-5	chr9:15506559-15506635	NONHSAT130268
12	lnc-TTC39B-5	chr9:15510815-15510944	NONHSAT130267
13	lnc-TTC39B-5	chr9:15510115-15510327	NONHSAT130267
14	lnc-TTC39B-5	chr9:15510115-15510324	NONHSAT130268
15	lnc-TTC39B-5	chr9:15510815-15510987	NONHSAT130269

No data

(count:6 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	PSIP1	hsa-miR-155-5p	chr9:15471175-15471168
2	PSIP1	hsa-miR-1	chr9:15470760-15470781
3	PSIP1	hsa-miR-375	chr9:15465204-15465225
4	PSIP1	hsa-miR-155-5p	chr9:15471022-15471044
5	PSIP1	hsa-miR-155-5p	chr9:15471169-15471191
6	PSIP1	hsa-miR-155-5p	chr9:15471262-15471283

Variant related genes	Relation type
FTH1P12	TF binding region
PSIP1	TF binding region
RN7SL98P	TF binding region
RNU6-319P	TF binding region
SNAPC3	TF binding region
FTH1P12	CpG island
PSIP1	CpG island
RN7SL98P	CpG island
RNU6-319P	CpG island
SNAPC3	CpG island
ENSG00000133065	chromatin interactions
ENSG00000251834	chromatin interactions
ENSG00000197756	chromatin interactions
ENSG00000238923	chromatin interactions
ENSG00000163755	chromatin interactions
ENSG00000232485	chromatin interactions
ENSG00000011021	chromatin interactions
ENSG00000137497	chromatin interactions
ENSG00000198374	chromatin interactions
ENSG00000164985	chromatin interactions
ENSG00000136450	chromatin interactions
ENSG00000091436	chromatin interactions
ENSG00000065882	chromatin interactions
ENSG00000177000	chromatin interactions
ENSG00000155158	chromatin interactions
ENSG00000164975	chromatin interactions
ENSG00000164989	chromatin interactions
ENSG00000111678	chromatin interactions
ENSG00000158710	chromatin interactions

Extended variants
information (count: 5321 )
Associated
traits (count: 101 )

Variant overlapped rSNPs/rCNVs (count:5321 , 50 per page) page: 1 2 3 4 5 6 7 ... 107

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10117968	chr9:15420805-15420806	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs377076311	chr9:15420916-15420917	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs73643905	chr9:15420930-15420931	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs185561286	chr9:15420932-15420933	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs556492748	chr9:15420934-15420935	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs546094668	chr9:15420944-15420945	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs577743116	chr9:15420967-15420968	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs563062024	chr9:15420985-15420986	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs576580880	chr9:15420999-15421000	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs560355500	chr9:15421025-15421026	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs369676060	chr9:15421041-15421042	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs143451552	chr9:15421045-15421046	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs542285793	chr9:15421063-15421064	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs562073609	chr9:15421095-15421096	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs189973097	chr9:15421143-15421144	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs377375771	chr9:15421150-15421151	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs577022802	chr9:15421154-15421155	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs527676215	chr9:15421161-15421162	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs1397214	chr9:15421170-15421171	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs536661367	chr9:15421191-15421192	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs181228347	chr9:15421195-15421196	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs186201416	chr9:15421198-15421199	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs146748208	chr9:15421204-15421205	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs551495744	chr9:15421213-15421214	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs545786165	chr9:15421233-15421234	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs140127656	chr9:15421245-15421246	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs533983872	chr9:15421261-15421262	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs149875584	chr9:15421275-15421276	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs567470923	chr9:15421282-15421283	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs538122132	chr9:15421328-15421329	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs144972109	chr9:15421333-15421334	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs190741591	chr9:15421361-15421362	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs149046486	chr9:15421376-15421377	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs184082509	chr9:15421392-15421393	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs147092608	chr9:15421412-15421413	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs2175259	chr9:15421423-15421424	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs115132709	chr9:15421473-15421474	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
38	rs561507190	chr9:15421523-15421524	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs36037232	chr9:15421576-15421577	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs531943169	chr9:15421582-15421583	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
41	rs533229938	chr9:15421585-15421586	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
42	rs79691692	chr9:15421633-15421634	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
43	rs549829706	chr9:15421639-15421640	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
44	rs534320885	chr9:15421648-15421649	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs569812504	chr9:15421673-15421674	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs1567452	chr9:15421679-15421680	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
47	rs187698859	chr9:15421710-15421711	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
48	rs370399746	chr9:15421719-15421720	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
49	rs559259546	chr9:15421782-15421783	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
50	rs528265221	chr9:15421808-15421809	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:101)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
abnormal development	18461090	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Developmental delay	21147756	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	22183965	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21611746	CNVD
Glycine encephalopathy	21572526	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Non-small cell lung cancer	19010865	CNVD
Myoepithelioma	18604193	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	19835627	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Lung adenocarcinoma	21935476	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ovarian cancer	21781307	CNVD
Pancreatic cancer	21811587	CNVD
Cancer	17440070	CNVD

Chromatin state (count:3593 , 50 per page) page: 1 2 3 4 5 6 7 ... 72

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:15417000-15421800	Weak transcription	HepG2	liver
2	chr9:15417000-15422000	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr9:15417000-15422000	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr9:15417000-15422200	Weak transcription	Esophagus	oesophagus
5	chr9:15418000-15422000	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr9:15418200-15421400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr9:15418200-15422000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr9:15418200-15422200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr9:15418400-15421600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
10	chr9:15418400-15421800	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr9:15418400-15421800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr9:15420600-15422000	Weak transcription	Brain Cingulate Gyrus	brain
13	chr9:15420600-15422000	Enhancers	Osteobl	bone
14	chr9:15421200-15422000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr9:15421400-15421600	Enhancers	Sigmoid Colon	Sigmoid Colon
16	chr9:15421400-15421800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr9:15421400-15421800	Enhancers	Duodenum Mucosa	Duodenum
18	chr9:15421400-15422000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr9:15421400-15422000	Enhancers	Rectal Mucosa Donor 31	rectum
20	chr9:15421400-15422200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
21	chr9:15421400-15422200	Enhancers	Fetal Intestine Small	intestine
22	chr9:15421600-15421800	Enhancers	Gastric	stomach
23	chr9:15421600-15422000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr9:15421600-15422000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr9:15421600-15422000	Enhancers	Fetal Brain Female	brain
26	chr9:15421600-15422000	Enhancers	Rectal Mucosa Donor 29	rectum
27	chr9:15421600-15422200	Enhancers	iPS-18 Cell Line	embryonic stem cell
28	chr9:15421600-15422200	Enhancers	Fetal Stomach	stomach
29	chr9:15421600-15422200	Enhancers	Fetal Thymus	thymus
30	chr9:15421800-15422000	Enhancers	ES-I3 Cell Line	embryonic stem cell
31	chr9:15421800-15422000	Enhancers	HUES6 Cell Line	embryonic stem cell
32	chr9:15421800-15422000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr9:15421800-15422000	Enhancers	iPS-15b Cell Line	embryonic stem cell
34	chr9:15421800-15422000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr9:15421800-15422000	Enhancers	Primary T cells from cord blood	blood
36	chr9:15421800-15422000	Enhancers	Primary T helper cells PMA-I stimulated	--
37	chr9:15421800-15422000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr9:15421800-15422000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr9:15421800-15422000	Enhancers	Adipose Nuclei	Adipose
40	chr9:15421800-15422000	Enhancers	Brain Inferior Temporal Lobe	brain
41	chr9:15421800-15422000	Enhancers	Colon Smooth Muscle	Colon
42	chr9:15421800-15422000	Enhancers	Fetal Intestine Large	intestine
43	chr9:15421800-15422000	Enhancers	Fetal Kidney	kidney
44	chr9:15421800-15422000	Enhancers	Fetal Lung	lung
45	chr9:15421800-15422000	Enhancers	Skeletal Muscle Female	skeletal muscle
46	chr9:15421800-15422000	Active TSS	Stomach Smooth Muscle	stomach
47	chr9:15421800-15422000	Enhancers	A549	lung
48	chr9:15421800-15422000	Enhancers	Hela-S3	cervix
49	chr9:15421800-15422000	Enhancers	HepG2	liver
50	chr9:15421800-15422000	Enhancers	HMEC	breast

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