Variant report

Variant	nsv894679
Chromosome Location	chr9:140640154-140710603
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1442)
CpG islands
(count:2261)
Chromatin interactive
region (count:46)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1442 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr9:140639968-140640492	GM12878	blood:	n/a	n/a
2	ATF2	chr9:140655366-140655982	GM12878	blood:	n/a	n/a
3	ATF2	chr9:140641019-140641614	GM12878	blood:	n/a	chr9:140641502-140641509
4	ATF2	chr9:140703449-140703804	GM12878	blood:	n/a	n/a
5	ATF2	chr9:140653453-140654075	GM12878	blood:	n/a	n/a
6	ATF2	chr9:140641009-140641568	GM12878	blood:	n/a	chr9:140641502-140641509
7	ATF2	chr9:140655367-140655871	GM12878	blood:	n/a	n/a
8	ATF2	chr9:140653486-140653886	GM12878	blood:	n/a	n/a
9	ATF2	chr9:140656794-140657321	GM12878	blood:	n/a	n/a
10	ATF2	chr9:140656647-140657415	GM12878	blood:	n/a	n/a
11	ATF2	chr9:140651891-140652508	GM12878	blood:	n/a	n/a
12	BACH1	chr9:140640186-140640518	K562	blood:	n/a	chr9:140640362-140640376
13	BACH1	chr9:140640020-140640565	H1-hESC	embryonic stem cell:	n/a	chr9:140640362-140640376
14	BATF	chr9:140639922-140640464	GM12878	blood:	n/a	n/a
15	BATF	chr9:140656857-140657244	GM12878	blood:	n/a	n/a
16	BATF	chr9:140641077-140641535	GM12878	blood:	n/a	chr9:140641365-140641374
17	BATF	chr9:140655479-140655850	GM12878	blood:	n/a	n/a
18	BATF	chr9:140641136-140641560	GM12878	blood:	n/a	chr9:140641365-140641374
19	BCL11A	chr9:140653509-140653972	GM12878	blood:	n/a	chr9:140653758-140653767
20	BCL11A	chr9:140656833-140657295	GM12878	blood:	n/a	chr9:140657018-140657027
21	BCL11A	chr9:140655419-140655822	GM12878	blood:	n/a	n/a
22	BCL11A	chr9:140651977-140652398	GM12878	blood:	n/a	n/a
23	BCL11A	chr9:140641106-140641493	GM12878	blood:	n/a	n/a
24	BCL11A	chr9:140674551-140675913	GM12878	blood:	n/a	n/a
25	BCL11A	chr9:140703488-140703846	GM12878	blood:	n/a	n/a
26	BCL11A	chr9:140652026-140652377	GM12878	blood:	n/a	n/a
27	BCL11A	chr9:140656803-140657323	GM12878	blood:	n/a	chr9:140657018-140657027
28	BCL11A	chr9:140641138-140641493	GM12878	blood:	n/a	n/a
29	BCL3	chr9:140675789-140676170	GM12878	blood:	n/a	n/a
30	BCL3	chr9:140674914-140675145	GM12878	blood:	n/a	n/a
31	BCL3	chr9:140702187-140702477	GM12878	blood:	n/a	n/a
32	BCL3	chr9:140675353-140676090	GM12878	blood:	n/a	n/a
33	BCL3	chr9:140674295-140674898	GM12878	blood:	n/a	n/a
34	BCL3	chr9:140707704-140708126	GM12878	blood:	n/a	n/a
35	BCL3	chr9:140676233-140676492	GM12878	blood:	n/a	n/a
36	BCL3	chr9:140675450-140675734	GM12878	blood:	n/a	n/a
37	BCL3	chr9:140699230-140700056	GM12878	blood:	n/a	n/a
38	BCL3	chr9:140707638-140708059	GM12878	blood:	n/a	n/a
39	BCL3	chr9:140674364-140675145	GM12878	blood:	n/a	n/a
40	BCL3	chr9:140699190-140700049	GM12878	blood:	n/a	n/a
41	BCLAF1	chr9:140655275-140655856	GM12878	blood:	n/a	n/a
42	BCLAF1	chr9:140641042-140641621	GM12878	blood:	n/a	n/a
43	BCLAF1	chr9:140656741-140657408	GM12878	blood:	n/a	chr9:140657018-140657027
44	BCLAF1	chr9:140653510-140654113	GM12878	blood:	n/a	chr9:140653758-140653767
45	BCLAF1	chr9:140655378-140655855	GM12878	blood:	n/a	n/a
46	BCLAF1	chr9:140703419-140703881	GM12878	blood:	n/a	n/a
47	BCLAF1	chr9:140639855-140640503	GM12878	blood:	n/a	n/a
48	BCLAF1	chr9:140653500-140654098	GM12878	blood:	n/a	chr9:140653758-140653767
49	BCLAF1	chr9:140651869-140652516	GM12878	blood:	n/a	n/a
50	BCLAF1	chr9:140703525-140703782	GM12878	blood:	n/a	n/a

(count:2261 , 50 per page) page: 1 2 3 4 5 6 7 ... 46

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:140647870-140647920	HMEC	breast:	n/a
2	chr9:140683212-140683262	NHDF-neo	bronchial:	n/a
3	chr9:140651049-140651099	SK-N-SH_RA	brain:	n/a
4	chr9:140703588-140703638	SK-N-SH	brain:	n/a
5	chr9:140647870-140647920	HMEC	breast:	n/a
6	chr9:140683212-140683262	NHDF-neo	bronchial:	n/a
7	chr9:140651049-140651099	SK-N-SH_RA	brain:	n/a
8	chr9:140703588-140703638	SK-N-SH	brain:	n/a
9	chr9:140676853-140676903	HCPEpiC	choroid plexus:	n/a
10	chr9:140656200-140656250	Hela-S3	cervix:	n/a
11	chr9:140684842-140684892	AG04449	skin:	fetal
12	chr9:140707378-140707428	GM12892	blood:	n/a
13	chr9:140674013-140674063	AG09319	gingival:	n/a
14	chr9:140687144-140687194	NT2-D1	testis:	n/a
15	chr9:140708214-140708264	AoSMC	blood vessel:	n/a
16	chr9:140675929-140675979	A549	lung:	n/a
17	chr9:140708214-140708264	ProgFib	skin:	n/a
18	chr9:140671632-140671682	IMR90	lung:	fetal
19	chr9:140656200-140656250	HCT-116	colon:	n/a
20	chr9:140681206-140681256	AG09319	gingival:	n/a
21	chr9:140683797-140683847	NHBE	bronchial:	n/a
22	chr9:140681206-140681256	K562	blood:	n/a
23	chr9:140684842-140684892	BJ	skin:	n/a
24	chr9:140709558-140709608	NHDF-neo	bronchial:	n/a
25	chr9:140683212-140683262	K562	blood:	n/a
26	chr9:140673936-140673986	IMR90	lung:	fetal
27	chr9:140673936-140673986	HNPCEpiC	eye:	n/a
28	chr9:140675616-140675666	A549	lung:	n/a
29	chr9:140676141-140676191	HEEpiC	esophagus:	n/a
30	chr9:140683649-140683699	SK-N-SH_RA	brain:	n/a
31	chr9:140652743-140652793	BE2_C	brain:	n/a
32	chr9:140671632-140671682	MCF-7	breast:	n/a
33	chr9:140673936-140673986	H1-hESC	embryonic stem cell:	embryo
34	chr9:140708214-140708264	HRPEpiC	eye:	n/a
35	chr9:140658436-140658486	HRE	kidney:	n/a
36	chr9:140683649-140683699	CMK	blood:	n/a
37	chr9:140705990-140706040	A549	lung:	n/a
38	chr9:140709558-140709608	SK-N-SH_RA	brain:	n/a
39	chr9:140681131-140681181	NH-A	brain:	n/a
40	chr9:140656200-140656250	SK-N-SH	brain:	n/a
41	chr9:140683649-140683699	HEEpiC	esophagus:	n/a
42	chr9:140671632-140671682	BE2_C	brain:	n/a
43	chr9:140675929-140675979	PFSK-1	brain:	n/a
44	chr9:140683212-140683262	HPAEpiC	pulmonary alveolar:	n/a
45	chr9:140651049-140651099	MCF-7	breast:	n/a
46	chr9:140656200-140656250	RPTEC	kidney:	n/a
47	chr9:140652711-140652761	AG10803	skin:	n/a
48	chr9:140704065-140704115	HCF	heart:	n/a
49	chr9:140704065-140704115	HepG2	liver:	n/a
50	chr9:140652685-140652735	GM19239	blood:	n/a

(count:46 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:140648145..140650901-chr9:140651290..140654289,3	K562	blood:
2	chr9:140679440..140682132-chr9:140702994..140705523,2	K562	blood:
3	chr9:140689938..140692282-chr9:140694934..140697761,2	MCF-7	breast:
4	chr9:140662415..140665334-chr9:140667330..140669473,2	MCF-7	breast:
5	chr9:140662415..140665334-chr9:140667330..140669473,2	MCF-7	breast:
6	chr9:140667645..140669335-chr9:140669650..140672274,2	K562	blood:
7	chr9:140637205..140639952-chr9:140640284..140643115,2	K562	blood:
8	chr9:140656494..140658049-chr9:140665141..140666954,2	MCF-7	breast:
9	chr9:140641621..140643809-chr9:140652826..140654596,2	MCF-7	breast:
10	chr9:140656494..140658049-chr9:140665141..140666954,2	MCF-7	breast:
11	chr9:140679440..140682132-chr9:140702994..140705523,2	K562	blood:
12	chr9:140634880..140636428-chr9:140652392..140655145,2	MCF-7	breast:
13	chr9:140620032..140621601-chr9:140644743..140646680,2	K562	blood:
14	chr9:140447426..140450339-chr9:140645965..140648548,2	K562	blood:
15	chr9:140471636..140473213-chr9:140654801..140656439,2	MCF-7	breast:
16	chr9:140667022..140668743-chr9:140670497..140672972,3	MCF-7	breast:
17	chr9:140641621..140643809-chr9:140652826..140654596,2	MCF-7	breast:
18	chr9:140672962..140675618-chr9:140678748..140680768,2	K562	blood:
19	chr9:140645397..140647015-chr9:140648908..140650692,2	K562	blood:
20	chr9:140637728..140639474-chr9:140643254..140646123,2	K562	blood:
21	chr9:140701752..140704462-chr9:140707799..140711263,3	MCF-7	breast:
22	chr9:140636490..140638088-chr9:140638645..140641455,2	MCF-7	breast:
23	chr9:140639569..140641263-chr9:140644746..140647470,2	MCF-7	breast:
24	chr9:140667022..140668743-chr9:140670497..140672972,3	MCF-7	breast:
25	chr9:140649627..140652485-chr9:140655729..140657732,2	MCF-7	breast:
26	chr9:140705835..140707524-chr9:140709188..140711003,2	K562	blood:
27	chr9:140699377..140703481-chr9:140712801..140716368,4	K562	blood:
28	chr9:140692420..140694081-chr9:140698871..140701591,2	K562	blood:
29	chr9:140567845..140570418-chr9:140651009..140653801,2	MCF-7	breast:
30	chr9:140692420..140694081-chr9:140698871..140701591,2	K562	blood:
31	chr9:140649627..140652485-chr9:140655729..140657732,2	MCF-7	breast:
32	chr9:140667645..140669335-chr9:140669650..140672274,2	K562	blood:
33	chr9:140639569..140641263-chr9:140644746..140647470,2	MCF-7	breast:
34	chr9:140706148..140707731-chr9:140712808..140715644,2	K562	blood:
35	chr9:140700744..140703518-chr9:140712352..140715179,2	K562	blood:
36	chr9:140645397..140647015-chr9:140648908..140650692,2	K562	blood:
37	chr9:140675774..140679711-chr9:140680099..140683198,4	K562	blood:
38	chr9:140672962..140675618-chr9:140678748..140680768,2	K562	blood:
39	chr9:140689938..140692282-chr9:140694934..140697761,2	MCF-7	breast:
40	chr9:140642217..140645455-chr9:140646960..140649880,4	K562	blood:
41	chr9:140591766..140593331-chr9:140667353..140669493,2	K562	blood:
42	chr9:140648170..140652364-chr9:140652458..140655697,5	MCF-7	breast:
43	chr9:140589041..140590820-chr9:140640169..140641796,2	K562	blood:
44	chr9:140499260..140502923-chr9:140667967..140671652,3	MCF-7	breast:
45	chr9:140512733..140514752-chr9:140658191..140660880,2	MCF-7	breast:
46	chr9:140700980..140705198-chr9:140707876..140710677,3	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AL772363.1-5	chr9:140682117-140683139	NONHSAT135752
2	lnc-CACNA1B-4	chr9:140657474-140659224	NONHSAT135751
3	lnc-AL772363.1-4	chr9:140703295-140703875	NONHSAT135753

No data

Variant related genes	Relation type
EHMT1	TF binding region
ENSG00000255585	TF binding region
EHMT1	CpG island
ENSG00000255585	CpG island
ENSG00000148399	chromatin interactions
ENSG00000203993	chromatin interactions
ENSG00000255585	chromatin interactions
ENSG00000197070	chromatin interactions
ENSG00000181090	chromatin interactions

Extended variants
information (count: 3317 )
Associated
traits (count: 20 )

Variant overlapped rSNPs/rCNVs (count:3317 , 50 per page) page: 1 2 3 4 5 6 7 ... 67

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs17496925	chr9:140640154-140640155	Genic enhancers Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs73669156	chr9:140640177-140640178	Genic enhancers Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs541209538	chr9:140640191-140640192	Genic enhancers Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs188246295	chr9:140640272-140640273	Genic enhancers Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs60885457	chr9:140640275-140640276	Genic enhancers Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs115506785	chr9:140640287-140640288	Genic enhancers Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs566179415	chr9:140640340-140640341	Genic enhancers Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs562354844	chr9:140640349-140640350	Genic enhancers Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs540133837	chr9:140640421-140640422	Genic enhancers Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs192597817	chr9:140640449-140640450	Genic enhancers Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs535166267	chr9:140640484-140640485	Genic enhancers Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs114959319	chr9:140640499-140640500	Genic enhancers Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs527519874	chr9:140640507-140640508	Genic enhancers Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs185600081	chr9:140640508-140640509	Genic enhancers Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs570624174	chr9:140640512-140640513	Genic enhancers Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs190458010	chr9:140640545-140640546	Genic enhancers Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs34425934	chr9:140640556-140640557	Genic enhancers Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs34852045	chr9:140640584-140640585	Genic enhancers Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs4876929	chr9:140640594-140640595	Genic enhancers Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs547165739	chr9:140640611-140640612	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs535831714	chr9:140640629-140640630	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs555674077	chr9:140640645-140640646	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs60428912	chr9:140640661-140640662	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs534955888	chr9:140640678-140640679	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs554802664	chr9:140640713-140640714	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs111516442	chr9:140640781-140640782	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs578093627	chr9:140640815-140640816	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs182079630	chr9:140640825-140640826	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs112611366	chr9:140640846-140640847	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs575997352	chr9:140640858-140640859	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs374196700	chr9:140640866-140640867	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs35286240	chr9:140640906-140640907	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs569980520	chr9:140640928-140640929	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs541833563	chr9:140640971-140640972	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs568274807	chr9:140640975-140640976	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs561992778	chr9:140640982-140640983	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs372683651	chr9:140641090-140641091	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs112206472	chr9:140641132-140641133	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs527607833	chr9:140641148-140641149	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs4319177	chr9:140641203-140641204	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs564126765	chr9:140641243-140641244	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs11999720	chr9:140641279-140641280	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs550044462	chr9:140641330-140641331	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs187125991	chr9:140641357-140641358	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs529276043	chr9:140641381-140641382	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs189002604	chr9:140641383-140641384	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs181359766	chr9:140641390-140641391	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs199930835	chr9:140641399-140641400	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs141570798	chr9:140641400-140641401	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs386739688	chr9:140641403-140641404	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:20)

Disease	PMID	Source
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Cardiac fibroma	18329553	CNVD
Lung cancer	19147751	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Chordoma	18071362	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Sudden cardiac death	19188705	CNVD
Myoepithelioma	18604193	CNVD
Tuberous sclerosis	19566914	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Mantle cell lymphoma	19029149	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:2705 , 50 per page) page: 1 2 3 4 5 6 7 ... 55

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140598800-140649800	Weak transcription	Stomach Mucosa	stomach
2	chr9:140619200-140651400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr9:140629400-140640800	Weak transcription	NHDF-Ad	bronchial
4	chr9:140631600-140640200	Strong transcription	Monocytes-CD14+_RO01746	blood
5	chr9:140632200-140649000	Weak transcription	Osteobl	bone
6	chr9:140633800-140643600	Strong transcription	Thymus	Thymus
7	chr9:140633800-140663000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
8	chr9:140634000-140643600	Strong transcription	Fetal Intestine Small	intestine
9	chr9:140634000-140645600	Strong transcription	Fetal Intestine Large	intestine
10	chr9:140634200-140646400	Strong transcription	Primary monocytes fromperipheralblood	blood
11	chr9:140634400-140640400	Strong transcription	Gastric	stomach
12	chr9:140634400-140649400	Strong transcription	Primary neutrophils fromperipheralblood	blood
13	chr9:140634600-140651400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr9:140634800-140641600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
15	chr9:140634800-140643800	Strong transcription	Rectal Mucosa Donor 29	rectum
16	chr9:140635000-140641600	Strong transcription	Brain Germinal Matrix	brain
17	chr9:140635000-140644200	Strong transcription	Fetal Stomach	stomach
18	chr9:140635600-140649600	Strong transcription	Duodenum Mucosa	Duodenum
19	chr9:140635800-140641200	Strong transcription	Lung	lung
20	chr9:140635800-140641400	Strong transcription	Placenta	Placenta
21	chr9:140635800-140643600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr9:140636000-140640400	Strong transcription	Rectal Mucosa Donor 31	rectum
23	chr9:140636000-140643200	Strong transcription	Sigmoid Colon	Sigmoid Colon
24	chr9:140636600-140640200	Strong transcription	Colonic Mucosa	Colon
25	chr9:140637000-140640400	Strong transcription	Aorta	Aorta
26	chr9:140637000-140641600	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
27	chr9:140637000-140644200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr9:140637200-140640800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr9:140637200-140643600	Strong transcription	NHEK	skin
30	chr9:140637200-140649600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
31	chr9:140637200-140666800	Strong transcription	Dnd41	blood
32	chr9:140637400-140640400	Strong transcription	Rectal Smooth Muscle	rectum
33	chr9:140637400-140640800	Strong transcription	Fetal Brain Female	brain
34	chr9:140637400-140643400	Strong transcription	Stomach Smooth Muscle	stomach
35	chr9:140637400-140643600	Strong transcription	Adipose Nuclei	Adipose
36	chr9:140637400-140643600	Strong transcription	NHLF	lung
37	chr9:140637600-140641600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr9:140637600-140641800	Strong transcription	H9 Cell Line	embryonic stem cell
39	chr9:140637600-140649400	Weak transcription	Right Atrium	heart
40	chr9:140637800-140640400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
41	chr9:140637800-140642200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr9:140637800-140642800	Strong transcription	HUES64 Cell Line	embryonic stem cell
43	chr9:140637800-140643400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr9:140637800-140643600	Strong transcription	Duodenum Smooth Muscle	Duodenum
45	chr9:140638000-140640400	Strong transcription	iPS-15b Cell Line	embryonic stem cell
46	chr9:140638000-140640800	Strong transcription	Right Ventricle	heart
47	chr9:140638000-140641600	Strong transcription	Colon Smooth Muscle	Colon
48	chr9:140638000-140641800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
49	chr9:140638000-140642600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr9:140638000-140643000	Strong transcription	Ovary	ovary

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