Variant report

Variant	nsv894682
Chromosome Location	chr9:140879370-141065054
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1755)
CpG islands
(count:1587)
Chromatin interactive
region (count:76)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1755 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr9:140884817-140885010	K562	blood:	n/a	n/a
2	ATF3	chr9:141054176-141054450	A549	lung:	n/a	n/a
3	ATF3	chr9:141020692-141020855	GM12878	blood:	n/a	n/a
4	ATF3	chr9:141020637-141020864	K562	blood:	n/a	n/a
5	ATF3	chr9:141020689-141020889	GM12878	blood:	n/a	n/a
6	BACH1	chr9:140918133-140918313	H1-hESC	embryonic stem cell:	n/a	n/a
7	BATF	chr9:141023409-141023594	GM12878	blood:	n/a	n/a
8	BATF	chr9:141020609-141020912	GM12878	blood:	n/a	n/a
9	BATF	chr9:141050185-141050584	GM12878	blood:	n/a	n/a
10	BATF	chr9:141064102-141064298	GM12878	blood:	n/a	n/a
11	BATF	chr9:141054182-141054368	GM12878	blood:	n/a	n/a
12	BCL11A	chr9:141054194-141054361	GM12878	blood:	n/a	n/a
13	BCL11A	chr9:141054141-141054402	GM12878	blood:	n/a	n/a
14	BCL11A	chr9:141023414-141023612	GM12878	blood:	n/a	n/a
15	BCL3	chr9:140993643-140993893	GM12878	blood:	n/a	n/a
16	BCL3	chr9:140904990-140905244	GM12878	blood:	n/a	n/a
17	BCL3	chr9:140910297-140910754	GM12878	blood:	n/a	n/a
18	BCL3	chr9:140910358-140910716	GM12878	blood:	n/a	n/a
19	BHLHE40	chr9:141044398-141044667	HepG2	liver:	n/a	n/a
20	BHLHE40	chr9:140879411-140879615	HepG2	liver:	n/a	n/a
21	BHLHE40	chr9:140948939-140949175	HepG2	liver:	n/a	n/a
22	BHLHE40	chr9:141061417-141061666	HepG2	liver:	n/a	n/a
23	BHLHE40	chr9:140948945-140949242	K562	blood:	n/a	n/a
24	BHLHE40	chr9:140993888-140994157	HepG2	liver:	n/a	n/a
25	BHLHE40	chr9:140993839-140994191	K562	blood:	n/a	n/a
26	BRCA1	chr9:140910350-140910549	GM12878	blood:	n/a	n/a
27	CBX3	chr9:141020180-141021846	K562	blood:	n/a	n/a
28	CBX3	chr9:141020423-141021627	K562	blood:	n/a	n/a
29	CBX3	chr9:141023334-141023686	K562	blood:	n/a	n/a
30	CBX3	chr9:141023337-141023724	K562	blood:	n/a	n/a
31	CBX3	chr9:140980110-140980451	HCT-116	colon:	n/a	n/a
32	CBX3	chr9:141041994-141042355	K562	blood:	n/a	n/a
33	CBX3	chr9:141044327-141044724	K562	blood:	n/a	n/a
34	CBX3	chr9:140980062-140980441	K562	blood:	n/a	n/a
35	CBX3	chr9:140980114-140980383	K562	blood:	n/a	n/a
36	CCNT2	chr9:140928501-140928648	K562	blood:	n/a	n/a
37	CCNT2	chr9:140918130-140918232	K562	blood:	n/a	n/a
38	CEBPB	chr9:140942551-140942648	Hela-S3	cervix:	n/a	chr9:140942603-140942614
39	CEBPB	chr9:140995483-140995724	A549	lung:	n/a	chr9:140995597-140995608
40	CEBPB	chr9:141021040-141021243	GM12878	blood:	n/a	n/a
41	CEBPB	chr9:141020616-141021529	K562	blood:	n/a	n/a
42	CEBPB	chr9:140968639-140968665	HepG2	liver:	n/a	n/a
43	CEBPB	chr9:140968573-140968696	A549	lung:	n/a	n/a
44	CEBPB	chr9:140990305-140990642	HepG2	liver:	n/a	chr9:140990481-140990492
45	CEBPB	chr9:140986589-140986844	MCF-7	breast:	n/a	n/a
46	CEBPB	chr9:140896273-140896377	A549	lung:	n/a	chr9:140896330-140896341 chr9:140896305-140896316
47	CEBPB	chr9:140926152-140926283	HepG2	liver:	n/a	n/a
48	CEBPB	chr9:140896188-140896435	IMR90	lung:	n/a	chr9:140896330-140896341 chr9:140896305-140896316
49	CEBPB	chr9:140926106-140926306	K562	blood:	n/a	n/a
50	CEBPB	chr9:141020799-141021006	GM12878	blood:	n/a	n/a

(count:1587 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:141016791-141016841	SK-N-SH_RA	brain:	n/a
2	chr9:141016791-141016841	SK-N-SH_RA	brain:	n/a
3	chr9:141042453-141042503	HAEpiC	amniotic membrane:	n/a
4	chr9:140942584-140942634	GM06990	blood:	n/a
5	chr9:140920003-140920053	T-47D	breast:	n/a
6	chr9:140939374-140939424	HCF	heart:	n/a
7	chr9:140937920-140937970	PANC-1	pancreas:	n/a
8	chr9:140917413-140917463	AoSMC	blood vessel:	n/a
9	chr9:140916980-140917030	U87	brain:	n/a
10	chr9:141016367-141016417	BJ	skin:	n/a
11	chr9:140939374-140939424	PrEC	prostate:	n/a
12	chr9:141042435-141042485	NB4	blood:	n/a
13	chr9:141007633-141007683	NHBE	bronchial:	n/a
14	chr9:141022253-141022303	PrEC	prostate:	n/a
15	chr9:141013537-141013587	HMEC	breast:	n/a
16	chr9:140939374-140939424	ECC-1	luminal epithelium:	n/a
17	chr9:140970188-140970238	SKMC	muscle:	n/a
18	chr9:141045017-141045067	Jurkat	blood:	n/a
19	chr9:141012312-141012362	CMK	blood:	n/a
20	chr9:141045017-141045067	HMEC	breast:	n/a
21	chr9:140939374-140939424	GM19239	blood:	n/a
22	chr9:141022253-141022303	HL-60	blood:	n/a
23	chr9:140916980-140917030	IMR90	lung:	fetal
24	chr9:141013537-141013587	CMK	blood:	n/a
25	chr9:140917413-140917463	H1-hESC	embryonic stem cell:	embryo
26	chr9:141016791-141016841	HCM	heart:	n/a
27	chr9:141017001-141017051	T-47D	breast:	n/a
28	chr9:141017001-141017051	IMR90	lung:	fetal
29	chr9:140916078-140916128	GM12891	blood:	n/a
30	chr9:141017001-141017051	SK-N-MC	brain:	n/a
31	chr9:140939374-140939424	AG09309	skin:	n/a
32	chr9:141045017-141045067	HNPCEpiC	eye:	n/a
33	chr9:140937920-140937970	HCPEpiC	choroid plexus:	n/a
34	chr9:141007633-141007683	HRE	kidney:	n/a
35	chr9:141013537-141013587	HEK293	kidney:	embryo
36	chr9:141044509-141044559	RPTEC	kidney:	n/a
37	chr9:140920003-140920053	HUVEC	blood vessel:	n/a
38	chr9:140944087-140944137	HCPEpiC	choroid plexus:	n/a
39	chr9:140939579-140939629	RPTEC	kidney:	n/a
40	chr9:141017001-141017051	PrEC	prostate:	n/a
41	chr9:140970188-140970238	HL-60	blood:	n/a
42	chr9:141017001-141017051	U87	brain:	n/a
43	chr9:141013537-141013587	Caco-2	colon:	n/a
44	chr9:141017457-141017507	ovcar-3	ovarian:	n/a
45	chr9:140917413-140917463	ovcar-3	ovarian:	n/a
46	chr9:140917413-140917463	HPAEpiC	pulmonary alveolar:	n/a
47	chr9:140939374-140939424	A549	lung:	n/a
48	chr9:141012312-141012362	HIPEpiC	eye:	n/a
49	chr9:140917413-140917463	GM12892	blood:	n/a
50	chr9:141045017-141045067	GM12891	blood:	n/a

(count:76 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr9:140867124..140870002-chr9:140953480..140955243,2	MCF-7	breast:
2	chr9:140952760..140954416-chr9:140956168..140957899,2	MCF-7	breast:
3	chr9:140938244..140939922-chr9:140958739..140960627,2	K562	blood:
4	chr9:140928490..140931085-chr9:140933253..140936075,2	MCF-7	breast:
5	chr9:140937047..140939903-chr9:140943662..140945593,2	MCF-7	breast:
6	chr9:140963638..140966246-chr9:140975970..140978505,2	MCF-7	breast:
7	chr9:140944821..140947749-chr9:140947953..140949469,2	K562	blood:
8	chr9:140919903..140921728-chr9:140923070..140927229,3	K562	blood:
9	chr9:140963638..140966246-chr9:140975970..140978505,2	MCF-7	breast:
10	chr9:141011439..141013713-chr9:141015634..141018380,2	K562	blood:
11	chr9:140889129..140892271-chr9:140900387..140902590,3	K562	blood:
12	chr9:140864855..140867051-chr9:140878528..140880494,2	K562	blood:
13	chr9:140954622..140956914-chr9:140961204..140963629,3	MCF-7	breast:
14	chr9:140878818..140881702-chr9:140884301..140887041,2	MCF-7	breast:
15	chr9:140954622..140956914-chr9:140961204..140963629,3	MCF-7	breast:
16	chr22:50714431..50715299-chr9:140947514..140948493,3	MCF-7	breast:
17	chr9:140937242..140939994-chr9:140944412..140947223,2	K562	blood:
18	chr9:140878818..140881702-chr9:140884301..140887041,2	MCF-7	breast:
19	chr9:140930141..140932633-chr9:140940366..140943124,2	MCF-7	breast:
20	chr9:140955879..140956683-chr9:140995540..140996190,2	MCF-7	breast:
21	chr9:140769881..140772281-chr9:140919838..140921575,2	K562	blood:
22	chr9:140949053..140949565-chr9:140995304..140996092,3	MCF-7	breast:
23	chr9:140937047..140939903-chr9:140943662..140945593,2	MCF-7	breast:
24	chr9:140928490..140931085-chr9:140933253..140936075,2	MCF-7	breast:
25	chr9:140991128..140993433-chr9:140998381..141000455,2	K562	blood:
26	chr9:140900853..140903158-chr9:140909684..140912170,2	MCF-7	breast:
27	chr9:140958325..140960613-chr9:140962095..140963626,2	K562	blood:
28	chr9:140960893..140963806-chr9:140965235..140966903,2	K562	blood:
29	chr9:140966280..140969244-chr9:140971430..140973098,2	K562	blood:
30	chr9:140966280..140969244-chr9:140971233..140973098,3	K562	blood:
31	chr9:137024514..137025058-chr9:141013083..141013583,2	HCT-116	colon:
32	chr10:122219..122922-chr9:141042181..141042681,2	MCF-7	breast:
33	chr10:122225..122779-chr9:141041705..141042205,2	MCF-7	breast:
34	chr9:140952348..140955305-chr9:140964883..140967739,2	MCF-7	breast:
35	chr9:140900561..140902093-chr9:140907866..140909465,2	MCF-7	breast:
36	chr9:140884223..140886209-chr9:140893112..140896030,2	K562	blood:
37	chr9:140944821..140947749-chr9:140947953..140949469,2	K562	blood:
38	chr9:140962197..140963909-chr9:140964440..140967429,2	K562	blood:
39	chr9:140900561..140902093-chr9:140907866..140909465,2	MCF-7	breast:
40	chr9:140909435..140911470-chr9:140917464..140919841,2	MCF-7	breast:
41	chr9:140954487..140957535-chr9:140966154..140968363,3	K562	blood:
42	chr9:140955941..140956581-chr9:140995170..140996036,2	MCF-7	breast:
43	chr9:140952760..140954416-chr9:140956168..140957899,2	MCF-7	breast:
44	chr9:140962197..140963909-chr9:140964440..140967429,2	K562	blood:
45	chr9:140966280..140969244-chr9:140971233..140973098,3	K562	blood:
46	chr9:140948638..140949637-chr9:141008065..141008656,3	MCF-7	breast:
47	chr9:141007252..141009770-chr9:141014340..141016354,2	MCF-7	breast:
48	chr9:140862016..140865668-chr9:140879753..140883106,4	MCF-7	breast:
49	chr9:140954487..140957535-chr9:140966154..140968363,3	K562	blood:
50	chr9:140875871..140879281-chr9:140879997..140882583,3	MCF-7	breast:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AL772363.1-7	chr9:140954809-140955130	NONHSAT135765
2	lnc-AL772363.1-6	chr9:140937901-140938239	NONHSAT135763
3	lnc-AL772363.1-6	chr9:140939331-140939523	NONHSAT135763
4	lnc-AL772363.1-6	chr9:140934955-140937453	NONHSAT135763
5	lnc-AL772363.1-7	chr9:140955477-140955599	NONHSAT135765
6	lnc-AL772363.1-7	chr9:140954806-140956852	NONHSAT135764

No data

Variant related genes	Relation type
TUBBP5	TF binding region
CACNA1B	TF binding region
ENSG00000229926	TF binding region
TUBBP5	CpG island
CACNA1B	CpG island
ENSG00000229926	CpG island
ENSG00000148408	chromatin interactions

Extended variants
information (count: 8036 )
Associated
traits (count: 19 )

Variant overlapped rSNPs/rCNVs (count:8036 , 50 per page) page: 1 2 3 4 5 6 7 ... 161

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7870040	chr9:140879370-140879371	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs528129719	chr9:140879372-140879373	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs201081187	chr9:140879387-140879388	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs377511793	chr9:140879388-140879389	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs571669322	chr9:140879417-140879418	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs540675308	chr9:140879422-140879423	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs183220316	chr9:140879423-140879424	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs577681222	chr9:140879442-140879443	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs561627115	chr9:140879443-140879444	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs374390779	chr9:140879481-140879482	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs7870208	chr9:140879544-140879545	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs530001358	chr9:140879556-140879557	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs543333017	chr9:140879557-140879558	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs550359806	chr9:140879583-140879584	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs570007227	chr9:140879586-140879587	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs560097252	chr9:140879607-140879608	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs528438186	chr9:140879710-140879711	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs551504725	chr9:140879778-140879779	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs75470672	chr9:140879789-140879790	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs530890641	chr9:140879891-140879892	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs551103770	chr9:140879943-140879944	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs569508325	chr9:140879958-140879959	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs545258284	chr9:140879969-140879970	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs7861230	chr9:140879980-140879981	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
25	rs555196592	chr9:140879997-140879998	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs565661387	chr9:140880051-140880052	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs534578409	chr9:140880078-140880079	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs147870536	chr9:140880127-140880128	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs140901410	chr9:140880194-140880195	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs543148666	chr9:140880209-140880210	Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
31	rs186130574	chr9:140880220-140880221	Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
32	rs574244293	chr9:140880260-140880261	Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
33	rs150164410	chr9:140880264-140880265	Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
34	rs112448842	chr9:140880288-140880289	Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
35	rs59937694	chr9:140880317-140880318	Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs148864344	chr9:140880342-140880343	Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
37	rs565110522	chr9:140880361-140880362	Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
38	rs530977553	chr9:140880396-140880397	Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
39	rs376900298	chr9:140880397-140880398	Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
40	rs561052403	chr9:140880407-140880408	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs190804405	chr9:140880431-140880432	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs548782972	chr9:140880434-140880435	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs183665365	chr9:140880535-140880536	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs529757619	chr9:140880537-140880538	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs534592283	chr9:140880539-140880540	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs12001491	chr9:140880595-140880596	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs571146532	chr9:140880635-140880636	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs117428628	chr9:140880636-140880637	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs557046836	chr9:140880699-140880700	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs573800356	chr9:140880761-140880762	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:19)

Disease	PMID	Source
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Cardiac fibroma	18329553	CNVD
Lung cancer	19147751	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Chordoma	18071362	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Sudden cardiac death	19188705	CNVD
Myoepithelioma	18604193	CNVD
Tuberous sclerosis	19566914	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Mantle cell lymphoma	19029149	CNVD

Chromatin state (count:984 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140855200-140881200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr9:140863000-140889400	Weak transcription	Brain Cingulate Gyrus	brain
3	chr9:140867000-140880400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr9:140871200-140884000	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr9:140872800-140884600	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr9:140873600-140880800	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr9:140874600-140904600	Weak transcription	Brain Angular Gyrus	brain
8	chr9:140875400-140880800	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr9:140877400-140883000	Strong transcription	Fetal Brain Female	brain
10	chr9:140877400-140883200	Weak transcription	Spleen	Spleen
11	chr9:140878200-140881400	Strong transcription	iPS-15b Cell Line	embryonic stem cell
12	chr9:140878400-140885400	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr9:140878400-140885400	Strong transcription	Brain Germinal Matrix	brain
14	chr9:140878600-140879800	Strong transcription	HUES6 Cell Line	embryonic stem cell
15	chr9:140878600-140881800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
16	chr9:140878800-140879800	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
17	chr9:140879200-140879600	Strong transcription	Brain Anterior Caudate	brain
18	chr9:140879600-140890000	Weak transcription	Brain Anterior Caudate	brain
19	chr9:140879800-140881200	Weak transcription	HUES6 Cell Line	embryonic stem cell
20	chr9:140879800-140904600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
21	chr9:140880200-140880400	Bivalent Enhancer	Right Ventricle	heart
22	chr9:140880400-140881400	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
23	chr9:140880400-140882800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
24	chr9:140880800-140882600	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
25	chr9:140880800-140883600	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
26	chr9:140881200-140881600	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
27	chr9:140881200-140882600	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
28	chr9:140881200-140882800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
29	chr9:140881400-140884400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr9:140881400-140885400	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
31	chr9:140881600-140882000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
32	chr9:140881800-140882800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr9:140881800-140885400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
34	chr9:140882000-140887000	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
35	chr9:140883000-140885400	ZNF genes & repeats	Fetal Brain Female	brain
36	chr9:140883200-140883400	Enhancers	Spleen	Spleen
37	chr9:140884400-140884600	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
38	chr9:140884400-140884800	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
39	chr9:140884400-140884800	Enhancers	K562	blood
40	chr9:140884400-140885200	ZNF genes & repeats	iPS DF 6.9 Cell Line	embryonic stem cell
41	chr9:140885400-140888400	Weak transcription	Brain Germinal Matrix	brain
42	chr9:140885400-140900800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
43	chr9:140885600-140885800	Weak transcription	Fetal Brain Female	brain
44	chr9:140894600-140916600	Weak transcription	Brain Anterior Caudate	brain
45	chr9:140896800-140898600	Weak transcription	Brain Cingulate Gyrus	brain
46	chr9:140896800-140903800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
47	chr9:140897200-140900800	Weak transcription	Brain Germinal Matrix	brain
48	chr9:140898200-140901200	Weak transcription	Fetal Brain Female	brain
49	chr9:140900800-140901400	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr9:140900800-140901600	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links