Variant report

Variant nsv897400
Chromosome Location chr11:48878863-48960697
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:336 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:48868000-48880400 Weak transcription Psoas Muscle Psoas
2 chr11:48868000-48893000 Weak transcription K562 blood
3 chr11:48876800-48883800 ZNF genes & repeats Primary T cells from cord blood blood
4 chr11:48876800-48884000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr11:48876800-48885400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
6 chr11:48878600-48879000 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
7 chr11:48879200-48880400 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr11:48879600-48886000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
9 chr11:48880000-48881200 ZNF genes & repeats H1 Cell Line embryonic stem cell
10 chr11:48880200-48882600 ZNF genes & repeats Primary hematopoietic stem cells blood
11 chr11:48880400-48880600 ZNF genes & repeats iPS DF 6.9 Cell Line embryonic stem cell
12 chr11:48880400-48880600 Flanking Bivalent TSS/Enh Primary T helper naive cells fromperipheralblood blood
13 chr11:48880400-48880600 ZNF genes & repeats Stomach Mucosa stomach
14 chr11:48880400-48880600 Enhancers HSMMtube muscle
15 chr11:48880400-48880800 Bivalent/Poised TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr11:48880400-48880800 Flanking Bivalent TSS/Enh H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr11:48880400-48880800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr11:48880400-48880800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
19 chr11:48880400-48880800 ZNF genes & repeats Primary T helper memory cells from peripheral blood 2 blood
20 chr11:48880400-48880800 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
21 chr11:48880400-48880800 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
22 chr11:48880400-48880800 ZNF genes & repeats Muscle Satellite Cultured Cells --
23 chr11:48880400-48880800 ZNF genes & repeats Adipose Nuclei Adipose
24 chr11:48880400-48880800 Active TSS Aorta Aorta
25 chr11:48880400-48880800 ZNF genes & repeats Brain Inferior Temporal Lobe brain
26 chr11:48880400-48880800 ZNF genes & repeats Brain Substantia Nigra brain
27 chr11:48880400-48880800 ZNF genes & repeats Gastric stomach
28 chr11:48880400-48880800 Active TSS Psoas Muscle Psoas
29 chr11:48880400-48880800 ZNF genes & repeats HUVEC blood vessel
30 chr11:48880400-48881000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr11:48880400-48882000 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
32 chr11:48880400-48883800 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr11:48880400-48885400 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
34 chr11:48880600-48880800 Bivalent/Poised TSS Primary T helper naive cells fromperipheralblood blood
35 chr11:48880600-48880800 Flanking Bivalent TSS/Enh Primary T cells effector/memory enriched fromperipheralblood blood
36 chr11:48880600-48880800 ZNF genes & repeats Colon Smooth Muscle Colon
37 chr11:48880600-48883200 Weak transcription HSMMtube muscle
38 chr11:48880600-48883400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr11:48880800-48881800 Weak transcription Brain Substantia Nigra brain
40 chr11:48880800-48881800 Weak transcription HUVEC blood vessel
41 chr11:48880800-48883200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr11:48880800-48883400 Weak transcription Aorta Aorta
43 chr11:48880800-48883400 Weak transcription Colon Smooth Muscle Colon
44 chr11:48881400-48883000 ZNF genes & repeats HepG2 liver
45 chr11:48881400-48887000 Weak transcription NHDF-Ad bronchial
46 chr11:48881800-48882000 ZNF genes & repeats HUVEC blood vessel
47 chr11:48881800-48882200 ZNF genes & repeats Brain Substantia Nigra brain
48 chr11:48882000-48882800 Weak transcription HUVEC blood vessel
49 chr11:48882400-48883600 ZNF genes & repeats Brain Substantia Nigra brain
50 chr11:48882400-48883800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell

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