Variant report

Variant	nsv898183
Chromosome Location	chr11:93725384-93906735
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2087)
CpG islands
(count:2808)
Chromatin interactive
region (count:84)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2087 , 50 per page) page: 1 2 3 4 5 6 7 ... 42

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:93885221-93885691	K562	blood:	n/a	n/a
2	ARID3A	chr11:93885276-93885716	HepG2	liver:	n/a	n/a
3	ARID3A	chr11:93757847-93758051	K562	blood:	n/a	n/a
4	ARID3A	chr11:93861663-93862073	HepG2	liver:	n/a	n/a
5	ARID3A	chr11:93811045-93811359	K562	blood:	n/a	n/a
6	ARID3A	chr11:93887802-93887881	HepG2	liver:	n/a	n/a
7	ARID3A	chr11:93868385-93868684	K562	blood:	n/a	n/a
8	ARID3A	chr11:93884527-93884708	HepG2	liver:	n/a	n/a
9	ARID3A	chr11:93864874-93865280	K562	blood:	n/a	n/a
10	ARID3A	chr11:93727028-93727190	K562	blood:	n/a	n/a
11	ARID3A	chr11:93861882-93862074	K562	blood:	n/a	n/a
12	ARID3A	chr11:93868971-93869805	K562	blood:	n/a	n/a
13	ARID3A	chr11:93840637-93840874	K562	blood:	n/a	n/a
14	ARID3A	chr11:93863941-93864082	HepG2	liver:	n/a	n/a
15	ARID3A	chr11:93849537-93849719	HepG2	liver:	n/a	n/a
16	ATF1	chr11:93778579-93778710	K562	blood:	n/a	n/a
17	ATF1	chr11:93865037-93865267	K562	blood:	n/a	n/a
18	ATF1	chr11:93810981-93811392	K562	blood:	n/a	n/a
19	ATF1	chr11:93885418-93885765	K562	blood:	n/a	n/a
20	ATF1	chr11:93875524-93875811	K562	blood:	n/a	n/a
21	ATF1	chr11:93861837-93862135	K562	blood:	n/a	n/a
22	ATF1	chr11:93869143-93869767	K562	blood:	n/a	n/a
23	ATF1	chr11:93757089-93757299	K562	blood:	n/a	n/a
24	ATF1	chr11:93754009-93754142	K562	blood:	n/a	n/a
25	ATF1	chr11:93779579-93779886	K562	blood:	n/a	n/a
26	ATF2	chr11:93861710-93862375	GM12878	blood:	n/a	n/a
27	ATF2	chr11:93861575-93862043	GM12878	blood:	n/a	n/a
28	ATF2	chr11:93861445-93861731	H1-hESC	embryonic stem cell:	n/a	n/a
29	ATF2	chr11:93861539-93862091	H1-hESC	embryonic stem cell:	n/a	n/a
30	ATF3	chr11:93869126-93869742	K562	blood:	n/a	n/a
31	ATF3	chr11:93862257-93862541	K562	blood:	n/a	chr11:93862383-93862392
32	ATF3	chr11:93885400-93885775	K562	blood:	n/a	n/a
33	ATF3	chr11:93885506-93885690	K562	blood:	n/a	n/a
34	BACH1	chr11:93861448-93862639	H1-hESC	embryonic stem cell:	n/a	n/a
35	BACH1	chr11:93865234-93865434	K562	blood:	n/a	n/a
36	BACH1	chr11:93754699-93755013	K562	blood:	n/a	n/a
37	BACH1	chr11:93839944-93839957	K562	blood:	n/a	n/a
38	BCL3	chr11:93861593-93862215	A549	lung:	n/a	chr11:93861906-93861915 chr11:93862074-93862087 chr11:93862098-93862107
39	BCL3	chr11:93861678-93862220	A549	lung:	n/a	chr11:93861906-93861915 chr11:93862074-93862087 chr11:93862098-93862107
40	BCLAF1	chr11:93861428-93862271	GM12878	blood:	n/a	chr11:93861906-93861915 chr11:93862074-93862087 chr11:93862098-93862107
41	BCLAF1	chr11:93861670-93862633	GM12878	blood:	n/a	chr11:93861906-93861915 chr11:93862277-93862286 chr11:93862074-93862087 chr11:93862098-93862107
42	BHLHE40	chr11:93861541-93863391	GM12878	blood:	n/a	chr11:93862043-93862059 chr11:93862148-93862164
43	BHLHE40	chr11:93865530-93865654	K562	blood:	n/a	n/a
44	BHLHE40	chr11:93861739-93862828	HepG2	liver:	n/a	chr11:93862043-93862059 chr11:93862148-93862164
45	BHLHE40	chr11:93904949-93905125	GM12878	blood:	n/a	n/a
46	BHLHE40	chr11:93875169-93875771	K562	blood:	n/a	chr11:93875385-93875401
47	BHLHE40	chr11:93779588-93779897	K562	blood:	n/a	n/a
48	BHLHE40	chr11:93868276-93868540	K562	blood:	n/a	chr11:93868348-93868364
49	BHLHE40	chr11:93810957-93811371	K562	blood:	n/a	n/a
50	BHLHE40	chr11:93863745-93864339	K562	blood:	n/a	n/a

(count:2808 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:93860745-93860795	NB4	blood:	n/a
2	chr11:93862060-93862110	NT2-D1	testis:	n/a
3	chr11:93860745-93860795	NB4	blood:	n/a
4	chr11:93862060-93862110	NT2-D1	testis:	n/a
5	chr11:93895866-93895916	IMR90	lung:	fetal
6	chr11:93875999-93876049	HCPEpiC	choroid plexus:	n/a
7	chr11:93875999-93876049	HPAEpiC	pulmonary alveolar:	n/a
8	chr11:93885254-93885304	AG04449	skin:	fetal
9	chr11:93861779-93861829	Hela-S3	cervix:	n/a
10	chr11:93822294-93822344	ovcar-3	ovarian:	n/a
11	chr11:93753348-93753398	ECC-1	luminal epithelium:	n/a
12	chr11:93895866-93895916	CMK	blood:	n/a
13	chr11:93753891-93753941	T-47D	breast:	n/a
14	chr11:93895866-93895916	MCF-7	breast:	n/a
15	chr11:93819150-93819200	SK-N-SH	brain:	n/a
16	chr11:93862516-93862566	GM06990	blood:	n/a
17	chr11:93754288-93754338	AG04450	lung:	fetal
18	chr11:93885254-93885304	AG04450	lung:	fetal
19	chr11:93905167-93905217	GM19239	blood:	n/a
20	chr11:93860745-93860795	GM19239	blood:	n/a
21	chr11:93838695-93838745	U87	brain:	n/a
22	chr11:93860745-93860795	K562	blood:	n/a
23	chr11:93895725-93895775	HCT-116	colon:	n/a
24	chr11:93846406-93846456	Jurkat	blood:	n/a
25	chr11:93862716-93862766	NH-A	brain:	n/a
26	chr11:93895725-93895775	NT2-D1	testis:	n/a
27	chr11:93862716-93862766	AG09309	skin:	n/a
28	chr11:93822184-93822234	A549	lung:	n/a
29	chr11:93861954-93862004	T-47D	breast:	n/a
30	chr11:93846406-93846456	HRPEpiC	eye:	n/a
31	chr11:93862257-93862307	CMK	blood:	n/a
32	chr11:93865443-93865493	AG09319	gingival:	n/a
33	chr11:93863858-93863908	GM06990	blood:	n/a
34	chr11:93754223-93754273	HAEpiC	amniotic membrane:	n/a
35	chr11:93895866-93895916	SK-N-SH	brain:	n/a
36	chr11:93860745-93860795	ovcar-3	ovarian:	n/a
37	chr11:93822184-93822234	SK-N-SH	brain:	n/a
38	chr11:93895866-93895916	SK-N-SH_RA	brain:	n/a
39	chr11:93862039-93862089	CMK	blood:	n/a
40	chr11:93822740-93822790	U87	brain:	n/a
41	chr11:93822184-93822234	HCM	heart:	n/a
42	chr11:93863858-93863908	SKMC	muscle:	n/a
43	chr11:93822294-93822344	Jurkat	blood:	n/a
44	chr11:93875999-93876049	A549	lung:	n/a
45	chr11:93861839-93861889	GM12878	blood:	n/a
46	chr11:93824553-93824603	HRPEpiC	eye:	n/a
47	chr11:93862594-93862644	A549	lung:	n/a
48	chr11:93862073-93862123	GM12892	blood:	n/a
49	chr11:93862516-93862566	A549	lung:	n/a
50	chr11:93754347-93754397	SAEC	small airway:	n/a

(count:84 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:93861121..93863513-chr11:93882964..93886089,4	K562	blood:
2	chr11:93875120..93879114-chr11:93880737..93884211,6	K562	blood:
3	chr11:93837870..93840032-chr11:93846900..93849669,2	MCF-7	breast:
4	chr11:93862864..93865828-chr11:93884142..93886084,2	MCF-7	breast:
5	chr11:93867049..93869190-chr11:94275385..94277277,2	K562	blood:
6	chr11:93862864..93865828-chr11:93884142..93886084,2	MCF-7	breast:
7	chr11:93834842..93837359-chr11:93842691..93845268,2	K562	blood:
8	chr11:93877656..93879395-chr11:93882351..93886074,3	MCF-7	breast:
9	chr11:93654234..93656516-chr11:93799480..93801603,2	K562	blood:
10	chr11:93875120..93879114-chr11:93880737..93884211,6	K562	blood:
11	chr11:93904970..93905492-chr11:93917118..93917628,2	K562	blood:
12	chr11:93865596..93867137-chr11:94149327..94151295,2	MCF-7	breast:
13	chr11:93835888..93838608-chr11:93905991..93908122,2	K562	blood:
14	chr11:93843038..93846219-chr11:93861023..93863615,3	MCF-7	breast:
15	chr11:93815540..93817373-chr11:93818109..93821051,2	K562	blood:
16	chr11:93861478..93862275-chr16:56642270..56643142,2	Hela-S3	cervix:
17	chr11:93811562..93814309-chr11:93814393..93816555,2	K562	blood:
18	chr11:93880754..93883524-chr11:93885061..93886886,2	K562	blood:
19	chr11:93874386..93876238-chr11:93877234..93879680,2	MCF-7	breast:
20	chr11:93867029..93870976-chr11:93873101..93877852,6	K562	blood:
21	chr11:93839493..93841789-chr11:93842574..93845095,2	K562	blood:
22	chr11:93860451..93862555-chr11:93865619..93868399,2	MCF-7	breast:
23	chr11:93877718..93879953-chr11:94225579..94227905,2	K562	blood:
24	chr11:93715164..93717058-chr11:93768133..93770763,2	K562	blood:
25	chr11:93899070..93901614-chr11:93903324..93905599,3	K562	blood:
26	chr11:93724420..93726827-chr11:93860849..93862959,2	MCF-7	breast:
27	chr11:93866030..93868662-chr11:93884389..93887583,3	K562	blood:
28	chr11:93654633..93655604-chr11:93769016..93769927,3	K562	blood:
29	chr11:93725136..93726953-chr11:93730088..93732138,2	K562	blood:
30	chr11:93783219..93786344-chr11:93787044..93789064,3	K562	blood:
31	chr11:93822033..93824296-chr11:93825015..93826574,2	K562	blood:
32	chr11:93844146..93846103-chr11:93859991..93861903,2	K562	blood:
33	chr11:93834842..93837359-chr11:93842691..93845268,2	K562	blood:
34	chr11:93877656..93879395-chr11:93882351..93886074,3	MCF-7	breast:
35	chr11:93837870..93840032-chr11:93846900..93849669,2	MCF-7	breast:
36	chr11:93861273..93862040-chr8:141473868..141474564,2	Hela-S3	cervix:
37	chr11:93844146..93845919-chr11:93859116..93861491,2	K562	blood:
38	chr11:93899070..93901930-chr11:93903657..93905599,2	K562	blood:
39	chr11:93730828..93732331-chr11:93734323..93737196,2	MCF-7	breast:
40	chr11:93818692..93821576-chr11:93823530..93825348,4	K562	blood:
41	chr11:93844204..93845981-chr11:93847595..93849691,2	MCF-7	breast:
42	chr11:93844146..93846103-chr11:93859991..93861903,2	K562	blood:
43	chr11:93822033..93824296-chr11:93825015..93826574,2	K562	blood:
44	chr11:93730828..93732331-chr11:93734323..93737196,2	MCF-7	breast:
45	chr11:93741108..93743362-chr11:93748550..93751276,2	K562	blood:
46	chr11:93840966..93842950-chr11:93859232..93861067,2	K562	blood:
47	chr1:151964881..151965549-chr11:93861551..93862232,2	Hela-S3	cervix:
48	chr11:93839493..93841789-chr11:93842574..93845095,2	K562	blood:
49	chr11:93790115..93792446-chr11:93795397..93797125,2	K562	blood:
50	chr11:93753591..93755146-chr11:93763747..93766351,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HEPHL1-1	chr11:93851046-93851433	NONHSAT023705
2	lnc-VSTM5-2	chr11:93731809-93732384	NONHSAT023700
3	lnc-VSTM5-3	chr11:93760135-93761825	NONHSAT023702

No data

Variant related genes	Relation type
ENSG00000227593	TF binding region
HPRTP3	TF binding region
HEPHL1	TF binding region
HPRTP4	TF binding region
PANX1	TF binding region
ENSG00000227593	CpG island
HPRTP3	CpG island
HEPHL1	CpG island
HPRTP4	CpG island
PANX1	CpG island
ENSG00000188825	chromatin interactions
ENSG00000197747	chromatin interactions
ENSG00000196371	chromatin interactions
ENSG00000134627	chromatin interactions
ENSG00000263966	chromatin interactions
ENSG00000110218	chromatin interactions
ENSG00000168876	chromatin interactions
ENSG00000020922	chromatin interactions
ENSG00000255995	chromatin interactions
ENSG00000101199	chromatin interactions
ENSG00000181333	chromatin interactions
ENSG00000125148	chromatin interactions
ENSG00000171843	chromatin interactions

Extended variants
information (count: 6961 )
Associated
traits (count: 94 )

Variant overlapped rSNPs/rCNVs (count:6961 , 50 per page) page: 1 2 3 4 5 6 7 ... 140

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2462741	chr11:93725384-93725385	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs187041222	chr11:93725392-93725393	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs369347646	chr11:93725393-93725394	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs191090759	chr11:93725416-93725417	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs545186539	chr11:93725442-93725443	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs543553583	chr11:93725515-93725516	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs575596343	chr11:93725534-93725535	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs563741939	chr11:93725582-93725583	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs542997717	chr11:93725588-93725589	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs561601522	chr11:93725601-93725602	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs183025933	chr11:93725617-93725618	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs530303430	chr11:93725695-93725696	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs547283710	chr11:93725760-93725761	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs565491683	chr11:93725769-93725770	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs73566826	chr11:93725776-93725777	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs188726377	chr11:93725796-93725797	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs193287381	chr11:93725824-93725825	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs569732561	chr11:93725918-93725919	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs535607453	chr11:93725929-93725930	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs536690931	chr11:93725949-93725950	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs116064920	chr11:93725950-93725951	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs567252780	chr11:93725960-93725961	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs373557828	chr11:93725975-93725976	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs36123736	chr11:93725982-93725983	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs201131022	chr11:93725989-93725990	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs11463927	chr11:93725990-93725991	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs377652999	chr11:93725991-93725992	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs185082571	chr11:93726019-93726020	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs73566830	chr11:93726036-93726037	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs577425384	chr11:93726052-93726053	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs1518574	chr11:93726072-93726073	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
32	rs557214683	chr11:93726098-93726099	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs72964674	chr11:93726165-93726166	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs375774777	chr11:93726238-93726239	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs369885259	chr11:93726252-93726253	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs536799373	chr11:93726253-93726254	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs542683329	chr11:93726254-93726255	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs561287399	chr11:93726298-93726299	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs528794133	chr11:93726349-93726350	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs77012930	chr11:93726388-93726389	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs540934920	chr11:93726406-93726407	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs565534014	chr11:93726438-93726439	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs188956903	chr11:93726502-93726503	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs551146741	chr11:93726541-93726542	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs563274348	chr11:93726549-93726550	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs530608338	chr11:93726559-93726560	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs548640965	chr11:93726607-93726608	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs369916151	chr11:93726612-93726613	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs534280067	chr11:93726655-93726656	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs546535646	chr11:93726799-93726800	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:94)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Developmental delay	21147756	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Renal cell carcinoma	18194544	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Ductal carcinoma	22052326	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Mental retardation	21062444	CNVD
Cancer	21499728	CNVD
Breast cancer	19181860	CNVD
Breast cancer	17603634	CNVD
Mantle cell lymphoma	19029149	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Breast cancer	21509527	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	18852474	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Breast cancer	22844521	CNVD
DNA damage stimulus	22844521	CNVD
DNA repair	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD

Chromatin state (count:2819 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93730800-93731200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr11:93731200-93735200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr11:93732800-93733600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr11:93733200-93733400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr11:93733200-93733800	Enhancers	NHDF-Ad	bronchial
6	chr11:93733400-93734000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr11:93733600-93734000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr11:93734000-93734400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr11:93734000-93734400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr11:93734400-93734600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr11:93734400-93734600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr11:93734600-93736000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr11:93734600-93737000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr11:93735200-93735600	Enhancers	K562	blood
15	chr11:93735200-93736000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr11:93735200-93736000	Enhancers	NHEK	skin
17	chr11:93735400-93735800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr11:93735400-93735800	Enhancers	Osteobl	bone
19	chr11:93735400-93736000	Enhancers	HMEC	breast
20	chr11:93735600-93736000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr11:93735800-93740600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr11:93736000-93740600	Weak transcription	HMEC	breast
23	chr11:93736000-93740600	Weak transcription	NHEK	skin
24	chr11:93736000-93740800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr11:93736000-93740800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr11:93740600-93742000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr11:93740600-93745800	Enhancers	NHEK	skin
28	chr11:93740600-93746000	Enhancers	HMEC	breast
29	chr11:93740800-93741800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr11:93740800-93746000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr11:93741200-93741800	Enhancers	Esophagus	oesophagus
32	chr11:93741800-93742800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr11:93741800-93742800	Weak transcription	Esophagus	oesophagus
34	chr11:93742000-93743000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr11:93742800-93743800	Enhancers	Esophagus	oesophagus
36	chr11:93742800-93745800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr11:93743000-93745400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr11:93745800-93747000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr11:93746000-93749600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
40	chr11:93747000-93747800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr11:93747800-93750400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr11:93749600-93754200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr11:93749600-93754400	Enhancers	HMEC	breast
44	chr11:93750200-93753800	Enhancers	NHEK	skin
45	chr11:93750400-93754800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
46	chr11:93750800-93752200	Enhancers	NH-A	brain
47	chr11:93751000-93754200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
48	chr11:93752200-93752400	Enhancers	Breast Myoepithelial Primary Cells	Breast
49	chr11:93752200-93758000	Weak transcription	NH-A	brain
50	chr11:93753400-93753800	Weak transcription	Breast Myoepithelial Primary Cells	Breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links