Variant report

Variant	nsv899025
Chromosome Location	chr12:40191778-40321846
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:658)
CpG islands
(count:183)
Chromatin interactive
region (count:27)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:658 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:40225811-40226081	K562	blood:	n/a	n/a
2	ARID3A	chr12:40200982-40201260	K562	blood:	n/a	n/a
3	ARID3A	chr12:40199534-40199560	K562	blood:	n/a	n/a
4	ARID3A	chr12:40225740-40226084	HepG2	liver:	n/a	n/a
5	ATF1	chr12:40233006-40233117	K562	blood:	n/a	n/a
6	ATF2	chr12:40229614-40229974	GM12878	blood:	n/a	n/a
7	ATF3	chr12:40296568-40297063	HCT-116	colon:	n/a	n/a
8	BATF	chr12:40229548-40229926	GM12878	blood:	n/a	n/a
9	BATF	chr12:40229525-40229935	GM12878	blood:	n/a	n/a
10	BCL11A	chr12:40229655-40229889	GM12878	blood:	n/a	n/a
11	BHLHE40	chr12:40200931-40201073	K562	blood:	n/a	n/a
12	BHLHE40	chr12:40229588-40229877	GM12878	blood:	n/a	n/a
13	BHLHE40	chr12:40214181-40214238	K562	blood:	n/a	n/a
14	CBX3	chr12:40272533-40272815	K562	blood:	n/a	n/a
15	CBX3	chr12:40296552-40297169	HCT-116	colon:	n/a	n/a
16	CEBPB	chr12:40218791-40218939	A549	lung:	n/a	chr12:40218888-40218899
17	CEBPB	chr12:40218675-40219002	IMR90	lung:	n/a	chr12:40218888-40218899
18	CEBPB	chr12:40317217-40317511	Hela-S3	cervix:	n/a	chr12:40317385-40317396
19	CEBPB	chr12:40317186-40317488	A549	lung:	n/a	chr12:40317385-40317396
20	CEBPB	chr12:40200853-40201073	H1-hESC	embryonic stem cell:	n/a	n/a
21	CEBPB	chr12:40207664-40207868	A549	lung:	n/a	chr12:40207818-40207829 chr12:40207818-40207829
22	CEBPB	chr12:40208494-40208781	K562	blood:	n/a	chr12:40208649-40208660
23	CEBPB	chr12:40208473-40208792	A549	lung:	n/a	chr12:40208649-40208660
24	CEBPB	chr12:40317246-40317541	MCF-7	breast:	n/a	chr12:40317385-40317396
25	CEBPB	chr12:40317249-40317476	H1-hESC	embryonic stem cell:	n/a	chr12:40317385-40317396
26	CEBPB	chr12:40296427-40297197	HCT-116	colon:	n/a	n/a
27	CEBPB	chr12:40207633-40207951	Hela-S3	cervix:	n/a	chr12:40207818-40207829 chr12:40207818-40207829
28	CEBPB	chr12:40317199-40317568	IMR90	lung:	n/a	chr12:40317385-40317396
29	CEBPB	chr12:40317248-40317411	HepG2	liver:	n/a	chr12:40317385-40317396
30	CEBPB	chr12:40306312-40306714	MCF-7	breast:	n/a	n/a
31	CEBPB	chr12:40208471-40208796	IMR90	lung:	n/a	chr12:40208649-40208660
32	CEBPB	chr12:40317209-40317567	HepG2	liver:	n/a	chr12:40317385-40317396
33	CEBPB	chr12:40296557-40297148	HCT-116	colon:	n/a	n/a
34	CEBPB	chr12:40317140-40317561	K562	blood:	n/a	chr12:40317385-40317396
35	CEBPB	chr12:40317183-40317595	MCF-7	breast:	n/a	chr12:40317385-40317396
36	CEBPB	chr12:40291029-40291240	K562	blood:	n/a	chr12:40291139-40291152
37	CEBPB	chr12:40208483-40208752	Hela-S3	cervix:	n/a	chr12:40208649-40208660
38	CEBPB	chr12:40208432-40208804	HepG2	liver:	n/a	chr12:40208649-40208660
39	CEBPB	chr12:40316452-40316786	Hela-S3	cervix:	n/a	chr12:40316601-40316614 chr12:40316526-40316539 chr12:40316601-40316614 chr12:40316603-40316614 chr12:40316673-40316686 chr12:40316528-40316539 chr12:40316613-40316624 chr12:40316675-40316686
40	CEBPB	chr12:40316543-40316782	HepG2	liver:	n/a	chr12:40316601-40316614 chr12:40316601-40316614 chr12:40316603-40316614 chr12:40316673-40316686 chr12:40316613-40316624 chr12:40316675-40316686
41	CEBPB	chr12:40317211-40317549	A549	lung:	n/a	chr12:40317385-40317396
42	CEBPB	chr12:40310947-40311180	HepG2	liver:	n/a	chr12:40311034-40311045
43	CEBPB	chr12:40218325-40219007	Hela-S3	cervix:	n/a	chr12:40218888-40218899
44	CEBPB	chr12:40218668-40219008	HepG2	liver:	n/a	chr12:40218888-40218899
45	CHD2	chr12:40229371-40229882	GM12878	blood:	n/a	n/a
46	CTCF	chr12:40200794-40201220	HepG2	liver:	n/a	n/a
47	CTCF	chr12:40200950-40201078	MCF-7	breast:	n/a	n/a
48	CTCF	chr12:40200956-40201095	SK-N-SH_RA	brain:	n/a	n/a
49	CTCF	chr12:40201060-40201210	HRE	kidney:	n/a	n/a
50	CTCF	chr12:40218440-40218590	HMEC	breast:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:40280075-40280125	T-47D	breast:	n/a
2	chr12:40280075-40280125	NB4	blood:	n/a
3	chr12:40268790-40268840	CMK	blood:	n/a
4	chr12:40197081-40197131	SAEC	small airway:	n/a
5	chr12:40268790-40268840	SK-N-MC	brain:	n/a
6	chr12:40268790-40268840	IMR90	lung:	fetal
7	chr12:40197081-40197131	GM12892	blood:	n/a
8	chr12:40197081-40197131	AG04450	lung:	fetal
9	chr12:40280075-40280125	HEEpiC	esophagus:	n/a
10	chr12:40280075-40280125	AG09319	gingival:	n/a
11	chr12:40280075-40280125	IMR90	lung:	fetal
12	chr12:40280075-40280125	SK-N-SH_RA	brain:	n/a
13	chr12:40268790-40268840	NB4	blood:	n/a
14	chr12:40280075-40280125	NHDF-neo	bronchial:	n/a
15	chr12:40268790-40268840	PANC-1	pancreas:	n/a
16	chr12:40280075-40280125	HUVEC	blood vessel:	n/a
17	chr12:40280075-40280125	HRPEpiC	eye:	n/a
18	chr12:40280075-40280125	GM12891	blood:	n/a
19	chr12:40280075-40280125	K562	blood:	n/a
20	chr12:40268790-40268840	HEK293	kidney:	embryo
21	chr12:40268790-40268840	HEEpiC	esophagus:	n/a
22	chr12:40197081-40197131	T-47D	breast:	n/a
23	chr12:40268790-40268840	ECC-1	luminal epithelium:	n/a
24	chr12:40280075-40280125	PrEC	prostate:	n/a
25	chr12:40197081-40197131	NHBE	bronchial:	n/a
26	chr12:40280075-40280125	BJ	skin:	n/a
27	chr12:40280075-40280125	GM06990	blood:	n/a
28	chr12:40197081-40197131	GM12891	blood:	n/a
29	chr12:40197081-40197131	Hepatocyte	liver:	n/a
30	chr12:40280075-40280125	Caco-2	colon:	n/a
31	chr12:40280075-40280125	HEK293	kidney:	embryo
32	chr12:40280075-40280125	HCPEpiC	choroid plexus:	n/a
33	chr12:40197081-40197131	AoSMC	blood vessel:	n/a
34	chr12:40197081-40197131	AG09319	gingival:	n/a
35	chr12:40280075-40280125	RPTEC	kidney:	n/a
36	chr12:40268790-40268840	PrEC	prostate:	n/a
37	chr12:40268790-40268840	MCF-7	breast:	n/a
38	chr12:40268790-40268840	HRPEpiC	eye:	n/a
39	chr12:40268790-40268840	LNCaP	prostate:	n/a
40	chr12:40197081-40197131	HAEpiC	amniotic membrane:	n/a
41	chr12:40197081-40197131	HNPCEpiC	eye:	n/a
42	chr12:40197081-40197131	AG10803	skin:	n/a
43	chr12:40197081-40197131	BJ	skin:	n/a
44	chr12:40280075-40280125	LNCaP	prostate:	n/a
45	chr12:40197081-40197131	HCM	heart:	n/a
46	chr12:40268790-40268840	AG09319	gingival:	n/a
47	chr12:40280075-40280125	BE2_C	brain:	n/a
48	chr12:40280075-40280125	AG04449	skin:	fetal
49	chr12:40280075-40280125	SAEC	small airway:	n/a
50	chr12:40197081-40197131	K562	blood:	n/a

(count:27 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:40245063..40247132-chr12:40258548..40261407,2	K562	blood:
2	chr12:40245063..40247132-chr12:40258548..40261407,2	K562	blood:
3	chr12:40223815..40226174-chr12:40498333..40500585,2	MCF-7	breast:
4	chr12:40233400..40236371-chr12:40236570..40239035,2	MCF-7	breast:
5	chr12:40313077..40313679-chr12:59990152..59990853,2	Hela-S3	cervix:
6	chr12:40205089..40207164-chr12:40209269..40211220,2	K562	blood:
7	chr12:40155001..40155717-chr12:40243633..40244224,2	MCF-7	breast:
8	chr12:40301225..40304048-chr12:40312812..40315442,2	K562	blood:
9	chr12:40210443..40213625-chr12:40221266..40224503,3	K562	blood:
10	chr12:40224533..40225359-chr12:40351916..40352430,2	MCF-7	breast:
11	chr12:40301225..40304048-chr12:40312812..40315442,2	K562	blood:
12	chr12:40154023..40155558-chr12:40243257..40245766,2	MCF-7	breast:
13	chr12:40266748..40268583-chr12:40273608..40276021,2	K562	blood:
14	chr12:40272751..40275551-chr12:46121726..46124669,2	MCF-7	breast:
15	chr12:40199999..40202917-chr12:40210641..40213494,3	K562	blood:
16	chr12:40218165..40218758-chr12:40352165..40352674,2	MCF-7	breast:
17	chr12:40205089..40207164-chr12:40209269..40211220,2	K562	blood:
18	chr12:40195514..40197262-chr12:40498609..40500773,2	MCF-7	breast:
19	chr12:40199999..40202917-chr12:40210641..40213494,2	K562	blood:
20	chr12:40271089..40271943-chr15:34306615..34307212,2	MCF-7	breast:
21	chr12:40280351..40282903-chr12:40497485..40499923,2	K562	blood:
22	chr12:40210443..40213625-chr12:40221266..40224503,3	K562	blood:
23	chr12:40233400..40236371-chr12:40236570..40239035,2	MCF-7	breast:
24	chr12:40239652..40241691-chr12:40246024..40247653,2	K562	blood:
25	chr12:40261148..40263319-chr12:40264058..40266162,2	MCF-7	breast:
26	chr12:40266748..40268583-chr12:40273608..40276021,2	K562	blood:
27	chr12:40239652..40241691-chr12:40246024..40247653,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000223082	TF binding region
ENSG00000199571	TF binding region
SLC2A13	TF binding region
ENSG00000223082	CpG island
ENSG00000199571	CpG island
SLC2A13	CpG island
ENSG00000223082	chromatin interactions
ENSG00000189079	chromatin interactions
ENSG00000151229	chromatin interactions
ENSG00000118596	chromatin interactions

Extended variants
information (count: 4401 )
Associated
traits (count: 60 )

Variant overlapped rSNPs/rCNVs (count:4401 , 50 per page) page: 1 2 3 4 5 6 7 ... 89

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10784065	chr12:40191778-40191779	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs532716866	chr12:40191783-40191784	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs75995532	chr12:40191791-40191792	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs73272589	chr12:40191816-40191817	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs11173631	chr12:40191919-40191920	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs549048221	chr12:40191929-40191930	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs567209163	chr12:40191967-40191968	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs540419288	chr12:40191968-40191969	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs189996189	chr12:40191974-40191975	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs80153476	chr12:40192000-40192001	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs571375740	chr12:40192009-40192010	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs538474061	chr12:40192010-40192011	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs79107034	chr12:40192021-40192022	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs532673183	chr12:40192037-40192038	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs536138073	chr12:40192078-40192079	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs111499232	chr12:40192126-40192127	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs531282839	chr12:40192132-40192133	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs573150226	chr12:40192161-40192162	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs148287146	chr12:40192175-40192176	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs141359081	chr12:40192346-40192347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs549891733	chr12:40192347-40192348	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs73272590	chr12:40192356-40192357	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs544850800	chr12:40192529-40192530	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs563071961	chr12:40192538-40192539	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs530423140	chr12:40192613-40192614	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs542470006	chr12:40192632-40192633	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs560739950	chr12:40192646-40192647	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs528063043	chr12:40192672-40192673	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs147422222	chr12:40192761-40192762	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs4238078	chr12:40192820-40192821	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs532069096	chr12:40192864-40192865	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs374337195	chr12:40192882-40192883	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs112730813	chr12:40192898-40192899	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs4768183	chr12:40192900-40192901	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs11831972	chr12:40192906-40192907	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs4768184	chr12:40192934-40192935	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs368048198	chr12:40192971-40192972	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs538596024	chr12:40192995-40192996	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs552071265	chr12:40193057-40193058	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs4768185	chr12:40193085-40193086	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs4768186	chr12:40193109-40193110	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs4768187	chr12:40193149-40193150	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs147456804	chr12:40193176-40193177	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs536148511	chr12:40193204-40193205	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs375663798	chr12:40193205-40193206	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs566771686	chr12:40193221-40193222	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs534225720	chr12:40193227-40193228	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs558662271	chr12:40193251-40193252	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs577452419	chr12:40193255-40193256	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs368493370	chr12:40193256-40193257	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:60)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Seminomas	18059402	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Neurodevelopmental disorder	22521361	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	17603634	CNVD
Cancer	21183584	CNVD
Hirschsprung''s Disease	21712996	CNVD
Lissencephaly	21572526	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	21251322	CNVD
small cell lung cancer	20016488	CNVD
Autism	20858243	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	19602461	CNVD
Breast cancer	17899364	CNVD
Cancer	20164920	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21364760	CNVD
Pancreatic cancer	17952125	CNVD
Osteosarcoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:410 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:40158200-40199000	Weak transcription	Left Ventricle	heart
2	chr12:40161600-40198800	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr12:40188800-40193400	Weak transcription	Rectal Smooth Muscle	rectum
4	chr12:40190800-40197600	Weak transcription	Colon Smooth Muscle	Colon
5	chr12:40191600-40194200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
6	chr12:40193400-40193600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr12:40193400-40193800	Enhancers	Rectal Smooth Muscle	rectum
8	chr12:40193600-40193800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr12:40193600-40193800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr12:40193800-40198400	Weak transcription	Rectal Smooth Muscle	rectum
11	chr12:40193800-40255800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr12:40194000-40198400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr12:40194600-40232600	Weak transcription	Right Ventricle	heart
14	chr12:40195600-40196000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr12:40197400-40197600	Enhancers	Liver	Liver
16	chr12:40197600-40198200	Weak transcription	Liver	Liver
17	chr12:40197600-40198800	Enhancers	Colon Smooth Muscle	Colon
18	chr12:40198200-40200600	Enhancers	Liver	Liver
19	chr12:40198400-40199200	Enhancers	Rectal Smooth Muscle	rectum
20	chr12:40198400-40200000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr12:40198600-40199000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
22	chr12:40198600-40199200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr12:40198800-40199200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
24	chr12:40198800-40199200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr12:40198800-40199200	Enhancers	Sigmoid Colon	Sigmoid Colon
26	chr12:40198800-40200000	Enhancers	Cortex derived primary cultured neurospheres	brain
27	chr12:40199000-40199200	Enhancers	Left Ventricle	heart
28	chr12:40199000-40199800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr12:40199200-40199800	Enhancers	ES-I3 Cell Line	embryonic stem cell
30	chr12:40199200-40199800	Enhancers	iPS-20b Cell Line	embryonic stem cell
31	chr12:40199200-40200000	Active TSS	Pancreatic Islets	Pancreatic Islet
32	chr12:40199200-40265400	Weak transcription	Sigmoid Colon	Sigmoid Colon
33	chr12:40199400-40199800	Enhancers	iPS-15b Cell Line	embryonic stem cell
34	chr12:40199800-40200000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
35	chr12:40200000-40205000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
36	chr12:40200000-40205800	Weak transcription	Cortex derived primary cultured neurospheres	brain
37	chr12:40205800-40206200	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
38	chr12:40206200-40221200	Weak transcription	Cortex derived primary cultured neurospheres	brain
39	chr12:40207200-40207400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr12:40207200-40207400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr12:40207400-40207600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr12:40207400-40207600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr12:40207600-40207800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr12:40207600-40208000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr12:40207600-40210000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
46	chr12:40207800-40208200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr12:40208000-40208200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
48	chr12:40208200-40208600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr12:40208200-40208800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr12:40208600-40211000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links