Variant report

Variant nsv900777
Chromosome Location chr13:87407377-87624393
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:275 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:87409200-87409800 Enhancers iPS-18 Cell Line embryonic stem cell
2 chr13:87409200-87410000 Enhancers ES-I3 Cell Line embryonic stem cell
3 chr13:87409200-87411200 Enhancers HMEC breast
4 chr13:87409400-87409800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
5 chr13:87409400-87410000 Enhancers HUES6 Cell Line embryonic stem cell
6 chr13:87409400-87410000 Enhancers HUES64 Cell Line embryonic stem cell
7 chr13:87409600-87410000 Enhancers iPS-20b Cell Line embryonic stem cell
8 chr13:87409600-87410400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr13:87409800-87411400 Active TSS Primary T cells fromperipheralblood blood
10 chr13:87409800-87411400 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
11 chr13:87409800-87416800 Active TSS Fetal Thymus thymus
12 chr13:87416800-87417000 Flanking Active TSS Fetal Thymus thymus
13 chr13:87417000-87417200 Active TSS Fetal Thymus thymus
14 chr13:87417200-87417800 Flanking Active TSS Fetal Thymus thymus
15 chr13:87417800-87418400 Active TSS Fetal Thymus thymus
16 chr13:87418000-87418200 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr13:87439800-87442600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
18 chr13:87440200-87441200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr13:87440400-87441200 Enhancers Brain Angular Gyrus brain
20 chr13:87440600-87441200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr13:87440800-87441200 Enhancers Brain Anterior Caudate brain
22 chr13:87440800-87441200 Enhancers Brain Substantia Nigra brain
23 chr13:87441200-87441800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr13:87441200-87444400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr13:87441800-87442000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr13:87443800-87444400 Active TSS ES-I3 Cell Line embryonic stem cell
27 chr13:87444000-87444400 Active TSS iPS-15b Cell Line embryonic stem cell
28 chr13:87444400-87444600 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr13:87444400-87444600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
30 chr13:87450200-87450600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr13:87450200-87450600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
32 chr13:87452600-87453200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr13:87455200-87455600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
34 chr13:87456600-87478400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr13:87462200-87463400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr13:87462200-87463400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
37 chr13:87462400-87462800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr13:87462400-87463200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
39 chr13:87462800-87463000 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr13:87463000-87463200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr13:87465400-87465800 Enhancers HUES48 Cell Line embryonic stem cell
42 chr13:87465600-87466000 Enhancers H9 Cell Line embryonic stem cell
43 chr13:87465600-87466000 Enhancers HUES6 Cell Line embryonic stem cell
44 chr13:87474600-87474800 Enhancers Liver Liver
45 chr13:87475000-87477200 Weak transcription Liver Liver
46 chr13:87477200-87478400 Enhancers Liver Liver
47 chr13:87478400-87478600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr13:87478600-87480000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr13:87479000-87479600 Active TSS Brain Inferior Temporal Lobe brain
50 chr13:87479400-87479600 Enhancers iPS-18 Cell Line embryonic stem cell

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