Variant report

Variant nsv909517
Chromosome Location chr18:28956904-29018114
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:242 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:28956800-28961000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr18:28959400-28959800 Enhancers Fetal Heart heart
3 chr18:28960200-28960600 Enhancers iPS-15b Cell Line embryonic stem cell
4 chr18:28960200-28960600 Enhancers iPS-20b Cell Line embryonic stem cell
5 chr18:28960200-28960600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
6 chr18:28960200-28960600 Enhancers Esophagus oesophagus
7 chr18:28960400-28961800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr18:28960400-28962000 Enhancers NHEK skin
9 chr18:28960600-28973400 Weak transcription Esophagus oesophagus
10 chr18:28960800-28961600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr18:28961000-28961600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr18:28962000-28962800 Enhancers Fetal Intestine Large intestine
13 chr18:28962000-28962800 Enhancers Fetal Intestine Small intestine
14 chr18:28966200-28968200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr18:28966800-28967000 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr18:28966800-28967200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr18:28967000-28967200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr18:28967000-28968000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr18:28968000-28968400 Enhancers HUES48 Cell Line embryonic stem cell
20 chr18:28968000-28968400 Enhancers HUES6 Cell Line embryonic stem cell
21 chr18:28968000-28968400 Enhancers HUES64 Cell Line embryonic stem cell
22 chr18:28968000-28968400 Enhancers iPS-15b Cell Line embryonic stem cell
23 chr18:28968000-28968400 Enhancers HepG2 liver
24 chr18:28968000-28968600 Enhancers iPS-18 Cell Line embryonic stem cell
25 chr18:28968400-28973400 Weak transcription HepG2 liver
26 chr18:28972000-28976400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr18:28972400-28972800 Enhancers Fetal Kidney kidney
28 chr18:28972800-28976800 Weak transcription Fetal Kidney kidney
29 chr18:28973400-28973600 Enhancers Duodenum Mucosa Duodenum
30 chr18:28973400-28973600 ZNF genes & repeats Esophagus oesophagus
31 chr18:28973400-28973600 Enhancers Small Intestine intestine
32 chr18:28973400-28973600 Enhancers HepG2 liver
33 chr18:28973400-28976600 Weak transcription ES-WA7 Cell Line embryonic stem cell
34 chr18:28973600-28974000 Weak transcription HepG2 liver
35 chr18:28973600-28975600 Weak transcription Duodenum Mucosa Duodenum
36 chr18:28973600-28989400 Weak transcription Esophagus oesophagus
37 chr18:28974000-28974200 Enhancers HepG2 liver
38 chr18:28974200-28975400 Weak transcription HepG2 liver
39 chr18:28975000-28983400 Enhancers Fetal Intestine Large intestine
40 chr18:28975400-28975600 Enhancers Fetal Intestine Small intestine
41 chr18:28975400-28977000 Enhancers HepG2 liver
42 chr18:28975600-28975800 Enhancers Duodenum Mucosa Duodenum
43 chr18:28975600-28975800 Enhancers Sigmoid Colon Sigmoid Colon
44 chr18:28975600-28976200 Weak transcription Fetal Intestine Small intestine
45 chr18:28975800-28976400 Enhancers Rectal Mucosa Donor 31 rectum
46 chr18:28975800-28976600 Weak transcription Duodenum Mucosa Duodenum
47 chr18:28975800-28976600 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr18:28976200-28983600 Enhancers Fetal Intestine Small intestine
49 chr18:28976400-28976600 Enhancers Rectal Mucosa Donor 29 rectum
50 chr18:28976400-28976800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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