Variant report

Variant	nsv911789
Chromosome Location	chr19:42901430-42906725
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:887)
CpG islands
(count:368)
Chromatin interactive
region (count:21)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:887 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:42905478-42905731	K562	blood:	n/a	n/a
2	ARID3A	chr19:42901102-42901497	K562	blood:	n/a	n/a
3	ARID3A	chr19:42905543-42905768	HepG2	liver:	n/a	n/a
4	ATF1	chr19:42900544-42901484	K562	blood:	n/a	n/a
5	ATF2	chr19:42900747-42901465	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr19:42900683-42901572	GM12878	blood:	n/a	n/a
7	ATF3	chr19:42900440-42901935	A549	lung:	n/a	chr19:42901125-42901138 chr19:42901125-42901138 chr19:42901125-42901135 chr19:42901128-42901135 chr19:42901127-42901135 chr19:42901124-42901139 chr19:42900536-42900545 chr19:42901125-42901135 chr19:42901127-42901138
8	BACH1	chr19:42900835-42901762	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr19:42906009-42906392	H1-hESC	embryonic stem cell:	n/a	n/a
10	BCL3	chr19:42900101-42902425	A549	lung:	n/a	n/a
11	BCL3	chr19:42905879-42906251	GM12878	blood:	n/a	n/a
12	BCL3	chr19:42904890-42906637	A549	lung:	n/a	n/a
13	BCL3	chr19:42905332-42906631	A549	lung:	n/a	n/a
14	BCLAF1	chr19:42905382-42905834	GM12878	blood:	n/a	n/a
15	BHLHE40	chr19:42900952-42901481	GM12878	blood:	n/a	chr19:42901325-42901341
16	BHLHE40	chr19:42900392-42901681	K562	blood:	n/a	chr19:42900537-42900546 chr19:42901325-42901341 chr19:42900583-42900599 chr19:42900534-42900547
17	BHLHE40	chr19:42906129-42906266	K562	blood:	n/a	n/a
18	BHLHE40	chr19:42905595-42905671	K562	blood:	n/a	n/a
19	BRCA1	chr19:42900650-42901484	Hela-S3	cervix:	n/a	n/a
20	BRCA1	chr19:42906228-42906265	GM12878	blood:	n/a	n/a
21	CBX3	chr19:42900802-42901539	K562	blood:	n/a	n/a
22	CBX3	chr19:42905995-42906319	K562	blood:	n/a	n/a
23	CCNT2	chr19:42900977-42901769	K562	blood:	n/a	n/a
24	CCNT2	chr19:42905996-42906282	K562	blood:	n/a	n/a
25	CEBPB	chr19:42906012-42906345	H1-hESC	embryonic stem cell:	n/a	n/a
26	CEBPB	chr19:42905986-42906404	MCF-7	breast:	n/a	n/a
27	CEBPB	chr19:42906006-42906338	A549	lung:	n/a	n/a
28	CEBPB	chr19:42906057-42906275	K562	blood:	n/a	n/a
29	CEBPB	chr19:42905991-42906334	HepG2	liver:	n/a	n/a
30	CEBPB	chr19:42905881-42906454	A549	lung:	n/a	n/a
31	CEBPB	chr19:42905989-42906352	IMR90	lung:	n/a	n/a
32	CEBPB	chr19:42900962-42901500	K562	blood:	n/a	n/a
33	CEBPB	chr19:42906005-42906327	HepG2	liver:	n/a	n/a
34	CHD1	chr19:42900896-42901767	GM12878	blood:	n/a	chr19:42901463-42901473
35	CHD2	chr19:42900970-42901710	H1-hESC	embryonic stem cell:	n/a	chr19:42901463-42901473
36	CHD2	chr19:42900673-42901578	Hela-S3	cervix:	n/a	chr19:42901463-42901473
37	CHD2	chr19:42906009-42906166	HepG2	liver:	n/a	n/a
38	CHD2	chr19:42906217-42906220	GM12878	blood:	n/a	n/a
39	CHD2	chr19:42900963-42901529	K562	blood:	n/a	chr19:42901463-42901473
40	CHD2	chr19:42900920-42901809	GM12878	blood:	n/a	chr19:42901463-42901473
41	CHD2	chr19:42905415-42905719	H1-hESC	embryonic stem cell:	n/a	n/a
42	CHD2	chr19:42906087-42906207	H1-hESC	embryonic stem cell:	n/a	n/a
43	CREB1	chr19:42900873-42901446	ECC-1	luminal epithelium:	n/a	chr19:42901125-42901138
44	CREB1	chr19:42900748-42901494	H1-hESC	embryonic stem cell:	n/a	chr19:42901125-42901138
45	CREB1	chr19:42900785-42901778	K562	blood:	n/a	chr19:42901125-42901138
46	CREB1	chr19:42900830-42901612	GM12878	blood:	n/a	chr19:42901125-42901138
47	CREB1	chr19:42905409-42906429	H1-hESC	embryonic stem cell:	n/a	n/a
48	CREB1	chr19:42905388-42906508	H1-hESC	embryonic stem cell:	n/a	n/a
49	CREB1	chr19:42900915-42901539	A549	lung:	n/a	chr19:42901125-42901138
50	CREB1	chr19:42900515-42901842	A549	lung:	n/a	chr19:42901125-42901138

(count:368 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:42905978-42906028	Hela-S3	cervix:	n/a
2	chr19:42905978-42906028	GM12891	blood:	n/a
3	chr19:42905978-42906028	Hela-S3	cervix:	n/a
4	chr19:42905978-42906028	GM12891	blood:	n/a
5	chr19:42905128-42905178	HRPEpiC	eye:	n/a
6	chr19:42906601-42906651	AG04449	skin:	fetal
7	chr19:42905978-42906028	CMK	blood:	n/a
8	chr19:42905978-42906028	MCF-7	breast:	n/a
9	chr19:42902024-42902074	H1-hESC	embryonic stem cell:	embryo
10	chr19:42905440-42905490	HCM	heart:	n/a
11	chr19:42905724-42905774	LNCaP	prostate:	n/a
12	chr19:42905978-42906028	U87	brain:	n/a
13	chr19:42905978-42906028	AG09319	gingival:	n/a
14	chr19:42906601-42906651	HAEpiC	amniotic membrane:	n/a
15	chr19:42905724-42905774	NHDF-neo	bronchial:	n/a
16	chr19:42905128-42905178	HCT-116	colon:	n/a
17	chr19:42905724-42905774	HCM	heart:	n/a
18	chr19:42906601-42906651	Jurkat	blood:	n/a
19	chr19:42906601-42906651	HNPCEpiC	eye:	n/a
20	chr19:42905978-42906028	HNPCEpiC	eye:	n/a
21	chr19:42905128-42905178	A549	lung:	n/a
22	chr19:42902024-42902074	GM19239	blood:	n/a
23	chr19:42905724-42905774	HCF	heart:	n/a
24	chr19:42905724-42905774	HepG2	liver:	n/a
25	chr19:42906601-42906651	HepG2	liver:	n/a
26	chr19:42905978-42906028	SKMC	muscle:	n/a
27	chr19:42905128-42905178	SK-N-MC	brain:	n/a
28	chr19:42906601-42906651	NHDF-neo	bronchial:	n/a
29	chr19:42902024-42902074	MCF-7	breast:	n/a
30	chr19:42902024-42902074	AG10803	skin:	n/a
31	chr19:42905440-42905490	NB4	blood:	n/a
32	chr19:42905978-42906028	AG09309	skin:	n/a
33	chr19:42906601-42906651	IMR90	lung:	fetal
34	chr19:42905128-42905178	HEEpiC	esophagus:	n/a
35	chr19:42905724-42905774	HMEC	breast:	n/a
36	chr19:42905440-42905490	NT2-D1	testis:	n/a
37	chr19:42902024-42902074	AG09319	gingival:	n/a
38	chr19:42906601-42906651	GM19239	blood:	n/a
39	chr19:42905978-42906028	T-47D	breast:	n/a
40	chr19:42902024-42902074	SK-N-SH_RA	brain:	n/a
41	chr19:42905724-42905774	MCF10A-Er-Src	breast:	n/a
42	chr19:42905724-42905774	GM12891	blood:	n/a
43	chr19:42905440-42905490	NH-A	brain:	n/a
44	chr19:42905724-42905774	HCT-116	colon:	n/a
45	chr19:42905724-42905774	SAEC	small airway:	n/a
46	chr19:42905440-42905490	U87	brain:	n/a
47	chr19:42905128-42905178	BJ	skin:	n/a
48	chr19:42905724-42905774	Hepatocyte	liver:	n/a
49	chr19:42905440-42905490	MCF10A-Er-Src	breast:	n/a
50	chr19:42902024-42902074	SAEC	small airway:	n/a

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:42904315..42908218-chr19:42909528..42916555,10	K562	blood:
2	chr19:42900633..42903687-chr19:42904617..42908034,6	MCF-7	breast:
3	chr19:42805304..42808319-chr19:42899510..42903078,3	K562	blood:
4	chr19:42903018..42905424-chr19:42908896..42911686,2	MCF-7	breast:
5	chr19:42786293..42789026-chr19:42903312..42906811,3	MCF-7	breast:
6	chr19:42900819..42903655-chr19:42904775..42907143,2	MCF-7	breast:
7	chr19:42900679..42903538-chr19:42909669..42912049,2	K562	blood:
8	chr19:42771317..42774035-chr19:42904213..42905727,2	MCF-7	breast:
9	chr19:42816448..42818844-chr19:42899476..42901532,2	K562	blood:
10	chr19:42636919..42637858-chr19:42905037..42905701,9	K562	blood:
11	chr19:42904602..42907517-chr19:42908247..42910710,2	MCF-7	breast:
12	chr19:42900633..42903687-chr19:42904617..42908034,6	MCF-7	breast:
13	chr19:42901625..42903508-chr19:42904581..42908984,3	K562	blood:
14	chr19:42829022..42830328-chr19:42905348..42906313,3	MCF-7	breast:
15	chr19:42583843..42585623-chr19:42905148..42907036,2	MCF-7	breast:
16	chr19:42901013..42903466-chr19:42908156..42911805,3	MCF-7	breast:
17	chr19:42746379..42748753-chr19:42901046..42902799,2	K562	blood:
18	chr19:42900819..42903655-chr19:42904775..42907143,2	MCF-7	breast:
19	chr19:42894017..42895736-chr19:42900827..42903287,2	MCF-7	breast:
20	chr19:42894410..42896597-chr19:42899559..42901447,2	MCF-7	breast:
21	chr19:42895668..42898012-chr19:42901990..42905454,3	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC011497.1-2	chr19:42905734-42905799	ENSG00000213904.4

No data

Variant related genes	Relation type
LIPE-AS1	TF binding region
LIPE-AS1	CpG island
ENSG00000105723	chromatin interactions
ENSG00000266226	chromatin interactions
ENSG00000079462	chromatin interactions
ENSG00000105427	chromatin interactions
ENSG00000268525	chromatin interactions
ENSG00000079435	chromatin interactions
ENSG00000188368	chromatin interactions
ENSG00000105429	chromatin interactions
ENSG00000079432	chromatin interactions
ENSG00000204957	chromatin interactions
ENSG00000213904	chromatin interactions
ENSG00000167619	chromatin interactions

Extended variants
information (count: 175 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:175 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10423978	chr19:42901430-42901431	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs531095184	chr19:42901464-42901465	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
3	rs375278890	chr19:42901477-42901478	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
4	rs368143749	chr19:42901544-42901545	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
5	rs186974070	chr19:42901631-42901632	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
6	rs528525143	chr19:42901638-42901639	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
7	rs547001960	chr19:42901641-42901642	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
8	rs191341568	chr19:42901671-42901672	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
9	rs111937568	chr19:42901721-42901722	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
10	rs369105797	chr19:42901747-42901748	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
11	rs531206630	chr19:42901785-42901786	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
12	rs545459484	chr19:42901830-42901831	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
13	rs528570008	chr19:42901851-42901852	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
14	rs557174190	chr19:42901853-42901854	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
15	rs36014413	chr19:42901938-42901939	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
16	rs568966645	chr19:42901978-42901979	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
17	rs183521501	chr19:42902020-42902021	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
18	rs187953988	chr19:42902024-42902025	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
19	rs112811505	chr19:42902096-42902097	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
20	rs546804343	chr19:42902121-42902122	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
21	rs34182001	chr19:42902144-42902145	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
22	rs192426786	chr19:42902150-42902151	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
23	rs371693318	chr19:42902170-42902171	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
24	rs113231549	chr19:42902171-42902172	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
25	rs200820799	chr19:42902173-42902174	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
26	rs539874407	chr19:42902177-42902178	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
27	rs554930299	chr19:42902182-42902183	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
28	rs573257607	chr19:42902240-42902241	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
29	rs542170169	chr19:42902249-42902250	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
30	rs563975406	chr19:42902303-42902304	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
31	rs564934047	chr19:42902307-42902308	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
32	rs527904381	chr19:42902311-42902312	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
33	rs114415173	chr19:42902356-42902357	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
34	rs565167598	chr19:42902367-42902368	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
35	rs185177700	chr19:42902368-42902369	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
36	rs74488308	chr19:42902479-42902480	Weak transcription Enhancers Active TSS	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
37	rs190073589	chr19:42902573-42902574	Weak transcription Enhancers Active TSS	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
38	rs192781118	chr19:42902576-42902577	Weak transcription Enhancers Active TSS	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
39	rs10418816	chr19:42902612-42902613	Weak transcription Enhancers Active TSS	Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs10419013	chr19:42902649-42902650	Weak transcription Enhancers Active TSS	Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs184861183	chr19:42902710-42902711	Weak transcription Enhancers Active TSS	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
42	rs551536035	chr19:42902759-42902760	Weak transcription Enhancers Active TSS	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
43	rs566268311	chr19:42902803-42902804	Weak transcription Enhancers Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
44	rs533636114	chr19:42902842-42902843	Weak transcription Enhancers Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
45	rs188251588	chr19:42902843-42902844	Weak transcription Enhancers Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
46	rs180915943	chr19:42902848-42902849	Weak transcription Enhancers Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
47	rs550202583	chr19:42902896-42902897	Weak transcription Enhancers Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
48	rs184979391	chr19:42902913-42902914	Weak transcription Enhancers Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
49	rs371378366	chr19:42902922-42902923	Weak transcription Enhancers Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
50	rs398041009	chr19:42902937-42902938	Weak transcription Enhancers Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Ovarian neoplasms	16753589	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Gastric cancer	18160780	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	19029149	CNVD
Breast cancer	20409316	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Renal cell carcinoma	18765545	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Genital abnormality	22378287	CNVD
Hypospadia	22378287	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Astrocytoma	22246337	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:846 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:42900200-42902200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr19:42900400-42901600	Active TSS	iPS-20b Cell Line	embryonic stem cell
3	chr19:42900400-42901600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr19:42900400-42901800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr19:42900400-42901800	Active TSS	HUES6 Cell Line	embryonic stem cell
6	chr19:42900400-42902000	Active TSS	H9 Cell Line	embryonic stem cell
7	chr19:42900400-42902200	Flanking Active TSS	Primary B cells from cord blood	blood
8	chr19:42900400-42902400	Active TSS	ES-I3 Cell Line	embryonic stem cell
9	chr19:42900400-42902400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
10	chr19:42900400-42902400	Flanking Active TSS	NHEK	skin
11	chr19:42900600-42901600	Active TSS	H1 Cell Line	embryonic stem cell
12	chr19:42900600-42901600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr19:42900600-42901600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr19:42900600-42901600	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr19:42900600-42901600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr19:42900600-42901600	Active TSS	Breast Myoepithelial Primary Cells	Breast
17	chr19:42900600-42901600	Active TSS	Muscle Satellite Cultured Cells	--
18	chr19:42900600-42901600	Active TSS	Brain Anterior Caudate	brain
19	chr19:42900600-42901600	Active TSS	Brain Hippocampus Middle	brain
20	chr19:42900600-42901600	Active TSS	Fetal Intestine Large	intestine
21	chr19:42900600-42901800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
22	chr19:42900600-42901800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr19:42900600-42901800	Active TSS	HUES48 Cell Line	embryonic stem cell
24	chr19:42900600-42901800	Active TSS	iPS-15b Cell Line	embryonic stem cell
25	chr19:42900600-42901800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
26	chr19:42900600-42901800	Flanking Active TSS	Placenta	Placenta
27	chr19:42900600-42902000	Active TSS	iPS-18 Cell Line	embryonic stem cell
28	chr19:42900600-42902000	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
29	chr19:42900600-42902000	Flanking Active TSS	Primary hematopoietic stem cells	blood
30	chr19:42900600-42902000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
31	chr19:42900600-42902000	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
32	chr19:42900600-42902000	Active TSS	Fetal Kidney	kidney
33	chr19:42900600-42902000	Flanking Active TSS	Thymus	Thymus
34	chr19:42900600-42902200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr19:42900600-42902200	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
36	chr19:42900600-42902200	Flanking Active TSS	Adipose Nuclei	Adipose
37	chr19:42900600-42902200	Flanking Active TSS	Fetal Muscle Trunk	muscle
38	chr19:42900600-42902200	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
39	chr19:42900600-42902200	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
40	chr19:42900600-42902200	Flanking Active TSS	HSMM	muscle
41	chr19:42900600-42902200	Flanking Active TSS	HUVEC	blood vessel
42	chr19:42900600-42902400	Active TSS	HUES64 Cell Line	embryonic stem cell
43	chr19:42900600-42902400	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr19:42900600-42902400	Flanking Active TSS	HMEC	breast
45	chr19:42900800-42901600	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr19:42900800-42901600	Active TSS	Primary T helper naive cells from peripheral blood	blood
47	chr19:42900800-42901600	Active TSS	Brain Germinal Matrix	brain
48	chr19:42900800-42901600	Active TSS	Colonic Mucosa	Colon
49	chr19:42900800-42901600	Active TSS	Duodenum Smooth Muscle	Duodenum
50	chr19:42900800-42901600	Active TSS	Esophagus	oesophagus

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