Variant report

Variant	nsv915918
Chromosome Location	chr15:34627109-34841422
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4061)
CpG islands
(count:4702)
Chromatin interactive
region (count:133)
LncRNA
region (count:7)
Mature miRNA
region (count: 4)
miRNA target
sites (count:2)

(count:4061 , 50 per page) page: 1 2 3 4 5 6 7 ... 82

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:34630317-34630551	K562	blood:	n/a	n/a
2	ARID3A	chr15:34650682-34650948	K562	blood:	n/a	n/a
3	ARID3A	chr15:34630085-34630347	HepG2	liver:	n/a	n/a
4	ARID3A	chr15:34781246-34781587	K562	blood:	n/a	n/a
5	ARID3A	chr15:34659662-34660316	K562	blood:	n/a	n/a
6	ARID3A	chr15:34731584-34731600	K562	blood:	n/a	n/a
7	ARID3A	chr15:34650075-34650188	K562	blood:	n/a	n/a
8	ARID3A	chr15:34628988-34629112	K562	blood:	n/a	n/a
9	ARID3A	chr15:34635077-34635629	HepG2	liver:	n/a	n/a
10	ARID3A	chr15:34659927-34660209	HepG2	liver:	n/a	n/a
11	ATF1	chr15:34635153-34635613	K562	blood:	n/a	n/a
12	ATF1	chr15:34633764-34633880	K562	blood:	n/a	n/a
13	ATF1	chr15:34761374-34761389	K562	blood:	n/a	n/a
14	ATF1	chr15:34807442-34807640	K562	blood:	n/a	n/a
15	ATF1	chr15:34808283-34808324	K562	blood:	n/a	n/a
16	ATF2	chr15:34659423-34660283	GM12878	blood:	n/a	n/a
17	ATF2	chr15:34628276-34629003	GM12878	blood:	n/a	n/a
18	ATF2	chr15:34635018-34635644	GM12878	blood:	n/a	n/a
19	ATF2	chr15:34627300-34627730	GM12878	blood:	n/a	n/a
20	ATF2	chr15:34627198-34628103	GM12878	blood:	n/a	n/a
21	ATF2	chr15:34634949-34635647	GM12878	blood:	n/a	n/a
22	ATF2	chr15:34635029-34635631	H1-hESC	embryonic stem cell:	n/a	n/a
23	ATF2	chr15:34662115-34662776	GM12878	blood:	n/a	n/a
24	ATF2	chr15:34662101-34662703	GM12878	blood:	n/a	n/a
25	ATF2	chr15:34635034-34635648	H1-hESC	embryonic stem cell:	n/a	n/a
26	ATF2	chr15:34628366-34630566	GM12878	blood:	n/a	n/a
27	ATF3	chr15:34635165-34635558	K562	blood:	n/a	n/a
28	ATF3	chr15:34635103-34635658	GM12878	blood:	n/a	n/a
29	ATF3	chr15:34635218-34635449	GM12878	blood:	n/a	n/a
30	ATF3	chr15:34635025-34635934	A549	lung:	n/a	n/a
31	ATF3	chr15:34781262-34781502	K562	blood:	n/a	n/a
32	ATF3	chr15:34629910-34630389	K562	blood:	n/a	chr15:34630060-34630080 chr15:34629995-34630004 chr15:34630294-34630303
33	ATF3	chr15:34635099-34635655	H1-hESC	embryonic stem cell:	n/a	n/a
34	ATF3	chr15:34635188-34635600	H1-hESC	embryonic stem cell:	n/a	n/a
35	BACH1	chr15:34629688-34630499	H1-hESC	embryonic stem cell:	n/a	n/a
36	BACH1	chr15:34806578-34807213	H1-hESC	embryonic stem cell:	n/a	n/a
37	BACH1	chr15:34659688-34659949	K562	blood:	n/a	n/a
38	BACH1	chr15:34659514-34660110	H1-hESC	embryonic stem cell:	n/a	n/a
39	BACH1	chr15:34729369-34729390	H1-hESC	embryonic stem cell:	n/a	n/a
40	BATF	chr15:34662171-34662762	GM12878	blood:	n/a	chr15:34662522-34662532
41	BATF	chr15:34695287-34695628	GM12878	blood:	n/a	n/a
42	BATF	chr15:34627412-34627720	GM12878	blood:	n/a	n/a
43	BATF	chr15:34762243-34762455	GM12878	blood:	n/a	n/a
44	BATF	chr15:34696116-34696523	GM12878	blood:	n/a	n/a
45	BATF	chr15:34662207-34662693	GM12878	blood:	n/a	chr15:34662522-34662532
46	BATF	chr15:34695261-34695641	GM12878	blood:	n/a	n/a
47	BATF	chr15:34815930-34816436	GM12878	blood:	n/a	n/a
48	BATF	chr15:34696017-34696728	GM12878	blood:	n/a	n/a
49	BATF	chr15:34808073-34808311	GM12878	blood:	n/a	n/a
50	BCL11A	chr15:34696015-34696513	GM12878	blood:	n/a	n/a

(count:4702 , 50 per page) page: 1 2 3 4 5 6 7 ... 95

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:34630351-34630401	AG04450	lung:	fetal
2	chr15:34637638-34637688	MCF10A-Er-Src	breast:	n/a
3	chr15:34638511-34638561	HCF	heart:	n/a
4	chr15:34634045-34634095	SK-N-SH	brain:	n/a
5	chr15:34726650-34726700	HRCEpiC	kidney:	n/a
6	chr15:34630351-34630401	AG04450	lung:	fetal
7	chr15:34637638-34637688	MCF10A-Er-Src	breast:	n/a
8	chr15:34638511-34638561	HCF	heart:	n/a
9	chr15:34634045-34634095	SK-N-SH	brain:	n/a
10	chr15:34726650-34726700	HRCEpiC	kidney:	n/a
11	chr15:34727209-34727259	Caco-2	colon:	n/a
12	chr15:34812400-34812450	SK-N-SH	brain:	n/a
13	chr15:34807143-34807193	MCF-7	breast:	n/a
14	chr15:34628769-34628819	LNCaP	prostate:	n/a
15	chr15:34729115-34729165	HCM	heart:	n/a
16	chr15:34640711-34640761	H1-hESC	embryonic stem cell:	embryo
17	chr15:34638511-34638561	RPTEC	kidney:	n/a
18	chr15:34631364-34631414	BE2_C	brain:	n/a
19	chr15:34629706-34629756	NH-A	brain:	n/a
20	chr15:34629727-34629777	ovcar-3	ovarian:	n/a
21	chr15:34629056-34629106	HEEpiC	esophagus:	n/a
22	chr15:34629998-34630048	Hela-S3	cervix:	n/a
23	chr15:34630011-34630061	AG04449	skin:	fetal
24	chr15:34630330-34630380	H1-hESC	embryonic stem cell:	embryo
25	chr15:34787920-34787970	HCF	heart:	n/a
26	chr15:34635538-34635588	T-47D	breast:	n/a
27	chr15:34807050-34807100	SK-N-MC	brain:	n/a
28	chr15:34659815-34659865	IMR90	lung:	fetal
29	chr15:34657364-34657414	HIPEpiC	eye:	n/a
30	chr15:34635399-34635449	AoSMC	blood vessel:	n/a
31	chr15:34628769-34628819	IMR90	lung:	fetal
32	chr15:34630047-34630097	U87	brain:	n/a
33	chr15:34785380-34785430	HCF	heart:	n/a
34	chr15:34729115-34729165	H1-hESC	embryonic stem cell:	embryo
35	chr15:34630351-34630401	HL-60	blood:	n/a
36	chr15:34629706-34629756	GM19239	blood:	n/a
37	chr15:34659687-34659737	ovcar-3	ovarian:	n/a
38	chr15:34640711-34640761	MCF-7	breast:	n/a
39	chr15:34781891-34781941	AG04449	skin:	fetal
40	chr15:34806349-34806399	AG09309	skin:	n/a
41	chr15:34634263-34634313	HCM	heart:	n/a
42	chr15:34631762-34631812	GM12891	blood:	n/a
43	chr15:34787920-34787970	HRCEpiC	kidney:	n/a
44	chr15:34629995-34630045	HepG2	liver:	n/a
45	chr15:34637567-34637617	SK-N-MC	brain:	n/a
46	chr15:34628815-34628865	LNCaP	prostate:	n/a
47	chr15:34629473-34629523	HCM	heart:	n/a
48	chr15:34637869-34637919	AG09309	skin:	n/a
49	chr15:34659304-34659354	HMEC	breast:	n/a
50	chr15:34637638-34637688	HCPEpiC	choroid plexus:	n/a

(count:133 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr15:34634560..34637281-chr15:34649248..34651493,2	MCF-7	breast:
2	chr15:34626796..34628377-chr15:34649112..34652053,2	MCF-7	breast:
3	chr15:34642775..34644501-chr15:34648793..34650495,2	K562	blood:
4	chr15:34638937..34641770-chr15:34643644..34645209,2	K562	blood:
5	chr15:34642775..34644501-chr15:34648793..34650495,2	K562	blood:
6	chr15:34628783..34632143-chr15:34633761..34637127,4	MCF-7	breast:
7	chr15:34659352..34660347-chr5:41870135..41870861,2	Hela-S3	cervix:
8	chr15:34632776..34635331-chr15:34879472..34881728,2	K562	blood:
9	chr15:34633629..34635584-chr15:34657779..34659599,2	MCF-7	breast:
10	chr15:34726561..34729987-chr15:34871215..34874723,3	K562	blood:
11	chr15:34634087..34636610-chr15:34652468..34654209,2	MCF-7	breast:
12	chr15:34500928..34503711-chr15:34659510..34661352,2	MCF-7	breast:
13	chr15:34516899..34519877-chr15:34629611..34631706,2	K562	blood:
14	chr15:34646339..34647917-chr15:34648014..34649516,2	K562	blood:
15	chr15:34537264..34538775-chr15:34630523..34633358,2	K562	blood:
16	chr15:34774551..34776237-chr15:34779411..34782082,2	K562	blood:
17	chr15:34516899..34519877-chr15:34627913..34631706,5	K562	blood:
18	chr15:34658959..34659493-chr17:56756873..56757469,2	Hela-S3	cervix:
19	chr15:34633689..34636672-chr15:34659379..34661265,2	MCF-7	breast:
20	chr15:34790342..34793794-chr15:34793900..34797346,3	K562	blood:
21	chr14:67878348..67879211-chr15:34659300..34659943,2	Hela-S3	cervix:
22	chr15:34626147..34627854-chr15:34654985..34656962,2	K562	blood:
23	chr15:34655711..34662054-chr15:34662110..34667087,9	K562	blood:
24	chr15:34630189..34630837-chr8:95835513..95836045,2	Hela-S3	cervix:
25	chr15:34637952..34639730-chr15:34647346..34650256,2	MCF-7	breast:
26	chr15:34790342..34793794-chr15:34793900..34797346,3	K562	blood:
27	chr15:34633865..34636798-chr15:34637017..34639359,2	K562	blood:
28	chr15:34640526..34642627-chr15:34658230..34660725,2	K562	blood:
29	chr15:34650334..34650906-chr15:34879916..34880747,2	MCF-7	breast:
30	chr15:34728587..34731061-chr15:34780506..34783189,3	K562	blood:
31	chr15:34646986..34649043-chr15:34651074..34652808,2	MCF-7	breast:
32	chr15:34774551..34776237-chr15:34779411..34782082,2	K562	blood:
33	chr11:62608503..62609297-chr15:34658796..34659673,3	Hela-S3	cervix:
34	chr15:34638937..34641770-chr15:34643644..34645209,2	K562	blood:
35	chr15:34786049..34786720-chr7:5632277..5632906,2	NB4	blood:
36	chr15:34636826..34639011-chr15:34652309..34655135,2	K562	blood:
37	chr15:34330374..34330923-chr15:34659512..34660213,2	K562	blood:
38	chr15:34633931..34636680-chr15:34728775..34730381,2	K562	blood:
39	chr15:34642499..34645200-chr15:34648396..34650653,3	K562	blood:
40	chr15:34635280..34637526-chr15:34658001..34660457,2	K562	blood:
41	chr15:34646339..34647917-chr15:34648014..34649516,2	K562	blood:
42	chr15:34499795..34503886-chr15:34627014..34631557,6	K562	blood:
43	chr15:34392784..34394847-chr15:34629052..34631553,2	K562	blood:
44	chr15:34658214..34660711-chr15:34806608..34809602,2	K562	blood:
45	chr15:34783968..34786265-chr15:34799018..34801586,2	K562	blood:
46	chr15:34658931..34659843-chr17:42401742..42402293,2	HCT-116	colon:
47	chr15:34659251..34659865-chr9:131940113..131940706,2	Hela-S3	cervix:
48	chr15:34645858..34649108-chr15:34651424..34655796,4	K562	blood:
49	chr15:34728066..34730668-chr15:34791069..34792682,2	K562	blood:
50	chr15:34629384..34632183-chr15:34656418..34659243,3	MCF-7	breast:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LPCAT4-1	chr15:34698878-34699071	NONHSAT041586
2	lnc-C15orf55-1	chr15:34628609-34630155	NONHSAT041578
3	lnc-C15orf55-1	chr15:34632408-34632569	NONHSAT041578
4	lnc-LPCAT4-1	chr15:34720816-34721126	NONHSAT041586
5	lnc-C15orf55-4	chr15:34752685-34752950	uc_384_+
6	lnc-LPCAT4-1	chr15:34699777-34699936	NONHSAT041586
7	lnc-GOLGA8B-1	chr15:34752685-34752950	uc_384_-

miRNA name	Chromosome Location	mirBase accession
hsa-miR-1233-3p	chr15:34674270-34674289	MIMAT0005588
hsa-miR-1233-5p	chr15:34820548-34820569	MIMAT0022943_1
hsa-miR-1233-3p	chr15:34820491-34820510	MIMAT0005588_1
hsa-miR-1233-5p	chr15:34674327-34674348	MIMAT0022943

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	GOLGA8B	hsa-miR-32-5p	chr15:34818291-34818311
2	GOLGA8B	hsa-miR-15a-5p	chr15:34817527-34817548

Variant related genes	Relation type
NUTM1	TF binding region
SLC12A6	TF binding region
MIR1233-2	TF binding region
ENSG00000259904	TF binding region
GOLGA8A	TF binding region
NOP10	TF binding region
ENSG00000266205	TF binding region
MIR1233-1	TF binding region
LPCAT4	TF binding region
ENSG00000261081	TF binding region
ENSG00000261559	TF binding region
ENSG00000260639	TF binding region
HNRNPLP2	TF binding region
GOLGA8B	TF binding region
NUTM1	CpG island
SLC12A6	CpG island
MIR1233-2	CpG island
ENSG00000259904	CpG island
GOLGA8A	CpG island
NOP10	CpG island
ENSG00000266205	CpG island
MIR1233-1	CpG island
LPCAT4	CpG island
ENSG00000261081	CpG island
ENSG00000261559	CpG island
ENSG00000260639	CpG island
HNRNPLP2	CpG island
GOLGA8B	CpG island
ENSG00000184009	chromatin interactions
ENSG00000083720	chromatin interactions
ENSG00000134153	chromatin interactions
ENSG00000184507	chromatin interactions
ENSG00000013306	chromatin interactions
ENSG00000259917	chromatin interactions
ENSG00000259904	chromatin interactions
ENSG00000162545	chromatin interactions
ENSG00000185085	chromatin interactions
ENSG00000100558	chromatin interactions
ENSG00000188483	chromatin interactions
ENSG00000215252	chromatin interactions
ENSG00000136877	chromatin interactions
ENSG00000164941	chromatin interactions
ENSG00000140199	chromatin interactions
ENSG00000171421	chromatin interactions
ENSG00000248668	chromatin interactions
ENSG00000266205	chromatin interactions
ENSG00000200997	chromatin interactions
ENSG00000169857	chromatin interactions
ENSG00000075618	chromatin interactions
ENSG00000175265	chromatin interactions
ENSG00000128463	chromatin interactions
ENSG00000134152	chromatin interactions
ENSG00000182405	chromatin interactions
ENSG00000176454	chromatin interactions
ENSG00000126698	chromatin interactions
ENSG00000182117	chromatin interactions
ENSG00000133316	chromatin interactions

Extended variants
information (count: 6258 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:6258 , 50 per page) page: 1 2 3 4 5 6 7 ... 126

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs560927716	chr15:34627122-34627123	Weak transcription Active TSS Flanking Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs528349291	chr15:34627148-34627149	Weak transcription Active TSS Flanking Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs7163195	chr15:34627152-34627153	Weak transcription Active TSS Flanking Active TSS Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
4	rs564536857	chr15:34627199-34627200	Weak transcription Active TSS Flanking Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs150122328	chr15:34627201-34627202	Weak transcription Active TSS Flanking Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs558712871	chr15:34627260-34627261	Weak transcription Active TSS Flanking Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs367819419	chr15:34627273-34627274	Weak transcription Active TSS Flanking Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs535965065	chr15:34627327-34627328	Weak transcription Active TSS Flanking Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs189941181	chr15:34627405-34627406	Weak transcription Active TSS Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs566991804	chr15:34627444-34627445	Weak transcription Active TSS Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs534501274	chr15:34627447-34627448	Weak transcription Active TSS Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs181164487	chr15:34627498-34627499	Weak transcription Active TSS Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs577294118	chr15:34627509-34627510	Weak transcription Active TSS Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs538207666	chr15:34627512-34627513	Weak transcription Active TSS Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs184522469	chr15:34627553-34627554	Weak transcription Active TSS Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs376652858	chr15:34627647-34627648	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs541969058	chr15:34627692-34627693	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs375421352	chr15:34627735-34627736	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs145525661	chr15:34627778-34627779	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs386782887	chr15:34627780-34627781	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs80298906	chr15:34627781-34627782	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs188989489	chr15:34627805-34627806	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs76198709	chr15:34627848-34627849	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs143451274	chr15:34627849-34627850	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs572881503	chr15:34627859-34627860	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs562149923	chr15:34627865-34627866	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs370008016	chr15:34627915-34627916	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs529786134	chr15:34627927-34627928	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs202106716	chr15:34627936-34627937	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs548024916	chr15:34627968-34627969	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs137859153	chr15:34627972-34627973	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs527911464	chr15:34627984-34627985	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs552753296	chr15:34628002-34628003	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs372038656	chr15:34628004-34628005	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs118068248	chr15:34628101-34628102	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs538540823	chr15:34628119-34628120	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs574993266	chr15:34628139-34628140	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs568509339	chr15:34628142-34628143	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs535942474	chr15:34628182-34628183	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs144147484	chr15:34628271-34628272	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs572978621	chr15:34628278-34628279	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs540571161	chr15:34628307-34628308	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs540022617	chr15:34628319-34628320	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs2615351	chr15:34628322-34628323	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs574237082	chr15:34628340-34628341	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs576681513	chr15:34628348-34628349	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs544139641	chr15:34628354-34628355	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs562139665	chr15:34628488-34628489	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs75634510	chr15:34628548-34628549	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs347836	chr15:34628570-34628571	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:68)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Angelman syndrome	16183798	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Abnormal corpus callosum	21572526	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Autism	19204725	CNVD
Schizophrenia	19204725	CNVD
Schizophrenia	19149910	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Legius syndrome	19443465	CNVD
Holoprosencephaly	21359414	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Prader-willi syndrome	21504564	CNVD
Cancer	17440070	CNVD
Basal cell lymphoma	17053054	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:3685 , 50 per page) page: 1 2 3 4 5 6 7 ... 74

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:34611000-34628600	Weak transcription	Lung	lung
2	chr15:34611200-34629200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr15:34614600-34628600	Weak transcription	Psoas Muscle	Psoas
4	chr15:34616200-34628600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr15:34618400-34627800	Weak transcription	Left Ventricle	heart
6	chr15:34619800-34628600	Weak transcription	Pancreas	Pancrea
7	chr15:34621000-34628200	Weak transcription	Fetal Muscle Leg	muscle
8	chr15:34621800-34628000	Weak transcription	Colon Smooth Muscle	Colon
9	chr15:34622200-34628600	Weak transcription	Placenta	Placenta
10	chr15:34623600-34629800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr15:34624400-34629200	Weak transcription	Fetal Intestine Large	intestine
12	chr15:34624800-34627800	Weak transcription	Fetal Lung	lung
13	chr15:34625400-34628400	Active TSS	GM12878-XiMat	blood
14	chr15:34625600-34627200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
15	chr15:34625600-34627200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr15:34625600-34629000	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
17	chr15:34625600-34629200	Enhancers	Fetal Heart	heart
18	chr15:34625600-34629600	Flanking Active TSS	Primary B cells from cord blood	blood
19	chr15:34625800-34627200	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
20	chr15:34625800-34627200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
21	chr15:34625800-34627600	Enhancers	Brain Germinal Matrix	brain
22	chr15:34625800-34629000	Flanking Active TSS	Primary T cells from cord blood	blood
23	chr15:34625800-34630000	Flanking Active TSS	Primary hematopoietic stem cells	blood
24	chr15:34626000-34627200	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
25	chr15:34626200-34627200	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr15:34626200-34627600	Enhancers	Hela-S3	cervix
27	chr15:34626200-34627800	Weak transcription	Spleen	Spleen
28	chr15:34626200-34628200	Flanking Active TSS	HUVEC	blood vessel
29	chr15:34626200-34629200	Enhancers	K562	blood
30	chr15:34626400-34627200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr15:34626400-34627200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
32	chr15:34626400-34627200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr15:34626400-34627200	Enhancers	HSMM	muscle
34	chr15:34626400-34627400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr15:34626400-34627400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr15:34626400-34627400	Weak transcription	Fetal Brain Male	brain
37	chr15:34626400-34627800	Active TSS	Primary T cells fromperipheralblood	blood
38	chr15:34626400-34627800	Enhancers	Brain Angular Gyrus	brain
39	chr15:34626400-34627800	Enhancers	Brain Substantia Nigra	brain
40	chr15:34626400-34627800	Enhancers	Skeletal Muscle Male	skeletal muscle
41	chr15:34626400-34628400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
42	chr15:34626400-34628600	Active TSS	Thymus	Thymus
43	chr15:34626400-34629000	Enhancers	Breast Myoepithelial Primary Cells	Breast
44	chr15:34626400-34629000	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
45	chr15:34626400-34629200	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
46	chr15:34626400-34629200	Active TSS	Rectal Mucosa Donor 29	rectum
47	chr15:34626400-34629400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
48	chr15:34626400-34629800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
49	chr15:34626400-34630400	Active TSS	Rectal Smooth Muscle	rectum
50	chr15:34626400-34630600	Active TSS	Aorta	Aorta

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