Variant report
Variant | nsv916152 |
---|---|
Chromosome Location | chr5:45273586-46115086 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1975)
- CpG islands (count:1281)
- Chromatin interactive region (count:30)
- LncRNA region (count:5)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ATF1 | chr5:45520472-45520538 | K562 | blood: | n/a | n/a |
2 | ATF1 | chr5:45779869-45779893 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr5:45384259-45384430 | K562 | blood: | n/a | n/a |
4 | ATF2 | chr5:45793625-45794610 | GM12878 | blood: | n/a | n/a |
5 | ATF2 | chr5:45793733-45794112 | GM12878 | blood: | n/a | n/a |
6 | BACH1 | chr5:45622469-45623083 | H1-hESC | embryonic stem cell: | n/a | n/a |
7 | BACH1 | chr5:45622547-45622743 | K562 | blood: | n/a | n/a |
8 | BACH1 | chr5:45695045-45695509 | H1-hESC | embryonic stem cell: | n/a | n/a |
9 | BACH1 | chr5:45696406-45696585 | H1-hESC | embryonic stem cell: | n/a | n/a |
10 | BACH1 | chr5:46078760-46079137 | H1-hESC | embryonic stem cell: | n/a | n/a |
11 | BACH1 | chr5:45694432-45694821 | H1-hESC | embryonic stem cell: | n/a | n/a |
12 | BATF | chr5:45793742-45794099 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr5:45793691-45794568 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr5:45794116-45794419 | GM12878 | blood: | n/a | n/a |
15 | BCL11A | chr5:45793646-45794647 | GM12878 | blood: | n/a | n/a |
16 | BCL11A | chr5:45793739-45794103 | GM12878 | blood: | n/a | n/a |
17 | BCL11A | chr5:45794121-45794555 | GM12878 | blood: | n/a | n/a |
18 | BCL11A | chr5:46093351-46093544 | GM12878 | blood: | n/a | n/a |
19 | BCL11A | chr5:45848140-45848326 | H1-hESC | embryonic stem cell: | n/a | n/a |
20 | BHLHE40 | chr5:45793537-45794787 | GM12878 | blood: | n/a | n/a |
21 | BHLHE40 | chr5:45799491-45799496 | GM12878 | blood: | n/a | n/a |
22 | BRCA1 | chr5:45412229-45412265 | Hela-S3 | cervix: | n/a | n/a |
23 | BRCA1 | chr5:45564807-45564864 | Hela-S3 | cervix: | n/a | n/a |
24 | BRCA1 | chr5:45551191-45551382 | H1-hESC | embryonic stem cell: | n/a | n/a |
25 | BRCA1 | chr5:45624018-45624277 | Hela-S3 | cervix: | n/a | n/a |
26 | BRCA1 | chr5:45696466-45696687 | H1-hESC | embryonic stem cell: | n/a | n/a |
27 | CBX3 | chr5:45279148-45279663 | HCT-116 | colon: | n/a | n/a |
28 | CBX3 | chr5:45385629-45386224 | HCT-116 | colon: | n/a | n/a |
29 | CBX3 | chr5:45277804-45278448 | HCT-116 | colon: | n/a | n/a |
30 | CBX3 | chr5:45385462-45386770 | HCT-116 | colon: | n/a | n/a |
31 | CEBPB | chr5:45740075-45740364 | A549 | lung: | n/a | chr5:45740245-45740256 |
32 | CEBPB | chr5:45822073-45822347 | HepG2 | liver: | n/a | chr5:45822202-45822215 chr5:45822242-45822253 chr5:45822202-45822213 |
33 | CEBPB | chr5:45893484-45893777 | A549 | lung: | n/a | chr5:45893595-45893608 chr5:45893595-45893608 chr5:45893597-45893608 chr5:45893595-45893608 chr5:45893696-45893709 chr5:45893595-45893606 |
34 | CEBPB | chr5:45443698-45444134 | HepG2 | liver: | n/a | chr5:45444028-45444039 chr5:45443784-45443795 chr5:45443784-45443797 |
35 | CEBPB | chr5:45588337-45588611 | HepG2 | liver: | n/a | n/a |
36 | CEBPB | chr5:45509164-45509380 | HepG2 | liver: | n/a | n/a |
37 | CEBPB | chr5:45893462-45893790 | HepG2 | liver: | n/a | chr5:45893595-45893608 chr5:45893595-45893608 chr5:45893597-45893608 chr5:45893595-45893608 chr5:45893696-45893709 chr5:45893595-45893606 |
38 | CEBPB | chr5:46098760-46098808 | A549 | lung: | n/a | n/a |
39 | CEBPB | chr5:45684255-45684548 | Hela-S3 | cervix: | n/a | chr5:45684417-45684428 chr5:45684416-45684429 chr5:45684418-45684427 chr5:45684416-45684427 chr5:45684418-45684427 chr5:45684416-45684429 chr5:45684418-45684427 chr5:45684418-45684427 |
40 | CEBPB | chr5:45787466-45787674 | HepG2 | liver: | n/a | chr5:45787597-45787608 |
41 | CEBPB | chr5:45454133-45454270 | HepG2 | liver: | n/a | chr5:45454221-45454232 |
42 | CEBPB | chr5:45385237-45386284 | HCT-116 | colon: | n/a | n/a |
43 | CEBPB | chr5:45781873-45782081 | HepG2 | liver: | n/a | chr5:45782013-45782024 |
44 | CEBPB | chr5:45684295-45684568 | A549 | lung: | n/a | chr5:45684417-45684428 chr5:45684416-45684429 chr5:45684418-45684427 chr5:45684416-45684427 chr5:45684418-45684427 chr5:45684416-45684429 chr5:45684418-45684427 chr5:45684418-45684427 |
45 | CEBPB | chr5:45684380-45684554 | H1-hESC | embryonic stem cell: | n/a | chr5:45684417-45684428 chr5:45684416-45684429 chr5:45684418-45684427 chr5:45684416-45684427 chr5:45684418-45684427 chr5:45684416-45684429 chr5:45684418-45684427 chr5:45684418-45684427 |
46 | CEBPB | chr5:45893506-45893786 | IMR90 | lung: | n/a | chr5:45893595-45893608 chr5:45893595-45893608 chr5:45893597-45893608 chr5:45893595-45893608 chr5:45893696-45893709 chr5:45893595-45893606 |
47 | CEBPB | chr5:45787427-45787684 | IMR90 | lung: | n/a | chr5:45787597-45787608 |
48 | CEBPB | chr5:45443682-45444157 | IMR90 | lung: | n/a | chr5:45444028-45444039 chr5:45443784-45443795 chr5:45443784-45443797 |
49 | CEBPB | chr5:45279219-45279745 | HCT-116 | colon: | n/a | n/a |
50 | CEBPB | chr5:45529506-45529762 | HepG2 | liver: | n/a | chr5:45529613-45529626 chr5:45529613-45529624 chr5:45529614-45529625 chr5:45529615-45529624 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr5:45696465-45696515 | HUVEC | blood vessel: | n/a |
2 | chr5:45553518-45553568 | A549 | lung: | n/a |
3 | chr5:45695922-45695972 | HepG2 | liver: | n/a |
4 | chr5:45678610-45678660 | HCM | heart: | n/a |
5 | chr5:45694523-45694573 | PrEC | prostate: | n/a |
6 | chr5:45553518-45553568 | PrEC | prostate: | n/a |
7 | chr5:45693264-45693314 | NT2-D1 | testis: | n/a |
8 | chr5:45696465-45696515 | Jurkat | blood: | n/a |
9 | chr5:45649048-45649098 | AoSMC | blood vessel: | n/a |
10 | chr5:45678610-45678660 | GM06990 | blood: | n/a |
11 | chr5:45695467-45695517 | Caco-2 | colon: | n/a |
12 | chr5:45696592-45696642 | NB4 | blood: | n/a |
13 | chr5:45695241-45695291 | HCM | heart: | n/a |
14 | chr5:45569042-45569092 | HUVEC | blood vessel: | n/a |
15 | chr5:45569042-45569092 | HCF | heart: | n/a |
16 | chr5:45696928-45696978 | Hela-S3 | cervix: | n/a |
17 | chr5:45288543-45288593 | HCPEpiC | choroid plexus: | n/a |
18 | chr5:45694523-45694573 | GM12878 | blood: | n/a |
19 | chr5:45553518-45553568 | AG09319 | gingival: | n/a |
20 | chr5:45696206-45696256 | ovcar-3 | ovarian: | n/a |
21 | chr5:45695241-45695291 | SAEC | small airway: | n/a |
22 | chr5:45696465-45696515 | HAEpiC | amniotic membrane: | n/a |
23 | chr5:45678610-45678660 | CMK | blood: | n/a |
24 | chr5:45693264-45693314 | PrEC | prostate: | n/a |
25 | chr5:45695922-45695972 | K562 | blood: | n/a |
26 | chr5:45288543-45288593 | NT2-D1 | testis: | n/a |
27 | chr5:45499395-45499445 | MCF10A-Er-Src | breast: | n/a |
28 | chr5:45696491-45696541 | BE2_C | brain: | n/a |
29 | chr5:45694523-45694573 | NH-A | brain: | n/a |
30 | chr5:45696465-45696515 | ovcar-3 | ovarian: | n/a |
31 | chr5:45694523-45694573 | LNCaP | prostate: | n/a |
32 | chr5:45724903-45724953 | MCF10A-Er-Src | breast: | n/a |
33 | chr5:45499395-45499445 | AG04450 | lung: | fetal |
34 | chr5:45693264-45693314 | HNPCEpiC | eye: | n/a |
35 | chr5:45696465-45696515 | BE2_C | brain: | n/a |
36 | chr5:45694523-45694573 | SKMC | muscle: | n/a |
37 | chr5:45693264-45693314 | Jurkat | blood: | n/a |
38 | chr5:45700402-45700452 | PrEC | prostate: | n/a |
39 | chr5:45649048-45649098 | AG09309 | skin: | n/a |
40 | chr5:45696491-45696541 | HNPCEpiC | eye: | n/a |
41 | chr5:45696592-45696642 | AoSMC | blood vessel: | n/a |
42 | chr5:45693264-45693314 | SAEC | small airway: | n/a |
43 | chr5:45696206-45696256 | SKMC | muscle: | n/a |
44 | chr5:45678610-45678660 | K562 | blood: | n/a |
45 | chr5:45694523-45694573 | Caco-2 | colon: | n/a |
46 | chr5:45695241-45695291 | GM12891 | blood: | n/a |
47 | chr5:45696928-45696978 | A549 | lung: | n/a |
48 | chr5:45553518-45553568 | MCF10A-Er-Src | breast: | n/a |
49 | chr5:45724903-45724953 | U87 | brain: | n/a |
50 | chr5:45678610-45678660 | GM12878 | blood: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr5:45292372..45295265-chr5:45301198..45304020,2 | MCF-7 | breast: | |
2 | chr5:45232284..45234490-chr5:45416046..45418115,2 | MCF-7 | breast: | |
3 | chr5:45038244..45038751-chr5:45773997..45774955,2 | MCF-7 | breast: | |
4 | chr17:56742322..56745282-chr5:45859385..45861280,2 | MCF-7 | breast: | |
5 | chr5:44952363..44953098-chr5:45773975..45774930,2 | MCF-7 | breast: | |
6 | chr5:45635537..45637341-chr5:45642108..45644494,2 | K562 | blood: | |
7 | chr5:45435601..45437646-chr5:45441992..45444757,2 | K562 | blood: | |
8 | chr5:45468898..45471467-chr5:45477657..45479826,2 | MCF-7 | breast: | |
9 | chr5:45389967..45392520-chr5:45393920..45396887,2 | K562 | blood: | |
10 | chr3:104438340..104439030-chr5:45401914..45402431,2 | MCF-7 | breast: | |
11 | chr5:45688826..45690382-chr5:45691879..45693420,2 | K562 | blood: | |
12 | chr15:66571588..66572090-chr5:45541388..45542303,2 | MCF-7 | breast: | |
13 | chr5:45635537..45637341-chr5:45642108..45644494,2 | K562 | blood: | |
14 | chr5:45468898..45471467-chr5:45477657..45479826,2 | MCF-7 | breast: | |
15 | chr1:205318512..205319277-chr5:45469628..45470349,2 | MCF-7 | breast: | |
16 | chr5:45688826..45690382-chr5:45691879..45693420,2 | K562 | blood: | |
17 | chr5:44952326..44952886-chr5:45639183..45639775,2 | MCF-7 | breast: | |
18 | chr11:62608627..62609151-chr5:45773998..45774657,2 | MCF-7 | breast: | |
19 | chr5:45700474..45703420-chr5:45719507..45722171,2 | MCF-7 | breast: | |
20 | chr5:45389967..45392520-chr5:45393920..45396887,2 | K562 | blood: | |
21 | chr5:45423533..45425292-chr5:45434104..45435924,2 | MCF-7 | breast: | |
22 | chr5:45700474..45703420-chr5:45719507..45722171,2 | MCF-7 | breast: | |
23 | chr5:45292372..45295265-chr5:45301198..45304020,2 | MCF-7 | breast: | |
24 | chr5:45038409..45039119-chr5:45520902..45521831,4 | MCF-7 | breast: | |
25 | chr5:45435601..45437646-chr5:45441992..45444757,2 | K562 | blood: | |
26 | chr13:55537336..55537947-chr5:45562607..45563107,2 | MCF-7 | breast: | |
27 | chr5:45487505..45488239-chr6:10695353..10695968,2 | MCF-7 | breast: | |
28 | chr5:44952200..44952811-chr5:45521283..45521849,2 | MCF-7 | breast: | |
29 | chr1:63102529..63105125-chr5:46100658..46103318,2 | MCF-7 | breast: | |
30 | chr5:45423533..45425292-chr5:45434104..45435924,2 | MCF-7 | breast: |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-MRPS30-13 | chr5:45574692-45576714 | NONHSAT101361 |
2 | lnc-MRPS30-12 | chr5:45558021-45560088 | NONHSAT101360 |
3 | lnc-MRPS30-14 | chr5:45752904-45753159 | NONHSAT101363 |
4 | lnc-MRPS30-14 | chr5:45749057-45749335 | NONHSAT101363 |
5 | lnc-MRPS30-14 | chr5:45753168-45753300 | NONHSAT101363 |
No data |
No data |
Variant related genes | Relation type |
---|---|
HCN1 | TF binding region |
ENSG00000250422 | TF binding region |
ENSG00000250122 | TF binding region |
ENSG00000250017 | TF binding region |
HCN1 | CpG island |
ENSG00000250422 | CpG island |
ENSG00000250122 | CpG island |
ENSG00000250017 | CpG island |
ENSG00000199426 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs536877970 | chr5:45273587-45273588 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs553396479 | chr5:45273588-45273589 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs190995513 | chr5:45273589-45273590 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs372893496 | chr5:45273590-45273591 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs541246929 | chr5:45273722-45273723 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs557649904 | chr5:45273732-45273733 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs371942791 | chr5:45273743-45273744 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs543307326 | chr5:45273757-45273758 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs562951660 | chr5:45273762-45273763 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs528819768 | chr5:45273776-45273777 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs183251296 | chr5:45273805-45273806 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs186809588 | chr5:45273820-45273821 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs567373490 | chr5:45273877-45273878 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs551985684 | chr5:45273886-45273887 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs562761591 | chr5:45273909-45273910 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs534599880 | chr5:45273910-45273911 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs565328924 | chr5:45274041-45274042 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs555157819 | chr5:45274093-45274094 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs567372845 | chr5:45274109-45274110 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs140818711 | chr5:45274120-45274121 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs534296960 | chr5:45274133-45274134 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs552936893 | chr5:45274253-45274254 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs552735567 | chr5:45274296-45274297 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs192214062 | chr5:45274355-45274356 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs16902082 | chr5:45274379-45274380 | Weak transcription Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
26 | rs546653104 | chr5:45274403-45274404 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs183342255 | chr5:45274422-45274423 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs368359671 | chr5:45274454-45274455 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs538744440 | chr5:45274481-45274482 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs117396593 | chr5:45274484-45274485 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs577374044 | chr5:45274500-45274501 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs377120049 | chr5:45274511-45274512 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs536961568 | chr5:45274543-45274544 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs556804957 | chr5:45274564-45274565 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs577476002 | chr5:45274580-45274581 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs187930464 | chr5:45274611-45274612 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs542244520 | chr5:45274629-45274630 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs148228430 | chr5:45274657-45274658 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs193184229 | chr5:45274734-45274735 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs370220529 | chr5:45274744-45274745 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs565484187 | chr5:45274761-45274762 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs531091658 | chr5:45274767-45274768 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs73752447 | chr5:45274825-45274826 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs185165273 | chr5:45274841-45274842 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs561595456 | chr5:45274875-45274876 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs188771537 | chr5:45274910-45274911 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs192497843 | chr5:45274920-45274921 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs566746879 | chr5:45275028-45275029 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs73099433 | chr5:45275033-45275034 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
50 | rs372536587 | chr5:45275060-45275061 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Medulloblastoma | 16783165 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Liposarcoma | 21253554 | CNVD |
Pancreatic endocrine tumor | 17639061 | CNVD |
Cervical Cancer | 21857958 | CNVD |
Cervical cancer | 21062161 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Oral cancer | 21386901 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Malignant mesothelioma | 18160781 | CNVD |
Pleural malignant mesothelioma | 18160781 | CNVD |
Cervical cancer | 18559093 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Phyllodes tumor | 17334353 | CNVD |
Malaria | 21533027 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Colorectal cancer | 21645411 | CNVD |
Gastric cancer | 22152101 | CNVD |
Oesophago-gastric ulcer | 22152101 | CNVD |
Ovarian cancer | 21781307 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Cancer | 20164919 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Bladder cancer | 21909424 | CNVD |
DNA damage stimulus | 22844521 | CNVD |
DNA repair | 22844521 | CNVD |
Breast cancer | 21785460 | CNVD |
Spinal muscular atrophy | 22422766 | CNVD |
Spinal muscular atrophy | 22558076 | CNVD |
Spinal muscular atrophy | 21320981 | CNVD |
Spinal muscular atrophy | 21762474 | CNVD |
Cancer | 16751803 | CNVD |
Breast cancer | 16608533 | CNVD |
Autism | 22495311 | CNVD |
Intellectual disability | 22102821 | CNVD |
Cervical squamous cell carcinoma | 21590768 | CNVD |
Prostate cancer | 21965145 | CNVD |
Cancer | 21183584 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Myeloproliferative neoplasm | 20015882 | CNVD |
Breast cancer | 17603634 | CNVD |
Melanoma | 18172304 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Lung cancer | 18438408 | CNVD |
Glioma | 20126413 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Breast cancer | 22032731 | CNVD |
Esophageal cancer | 20955586 | CNVD |
Breast cancer | 17133270 | CNVD |
Congenital anomalies of the kidney and urinary tract | 18694510 | CNVD |
Breast cancer | 17393978 | CNVD |
Pleomorphic liposarcoma | 18784837 | CNVD |
Invasive pancreatic ductal carcinoma | 16982739 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Ovarian clear cell carcinoma | 19293255 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Intellectual disability | 21811512 | CNVD |
Lung adenocarcinoma | 21935476 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Intracranial aneurysm | 16715129 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Cancer | 21359685 | CNVD |
adenomatous polyposis | 22470819 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Breast cancer | 21364760 | CNVD |
Breast cancer | 22522925 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Cancer | 20164920 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Bipolar disorder | 19114987 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:45272000-45277400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
2 | chr5:45273400-45273600 | Enhancers | Fetal Heart | heart |
3 | chr5:45273400-45273600 | Enhancers | Skeletal Muscle Male | skeletal muscle |
4 | chr5:45273400-45273600 | Enhancers | Skeletal Muscle Female | skeletal muscle |
5 | chr5:45273600-45274800 | Enhancers | Liver | Liver |
6 | chr5:45274000-45275000 | Enhancers | Rectal Mucosa Donor 31 | rectum |
7 | chr5:45274800-45275000 | Enhancers | Rectal Mucosa Donor 29 | rectum |
8 | chr5:45275000-45276000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
9 | chr5:45276000-45276400 | Enhancers | Rectal Mucosa Donor 29 | rectum |
10 | chr5:45277000-45278000 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
11 | chr5:45277400-45280400 | Enhancers | HUES64 Cell Line | embryonic stem cell |
12 | chr5:45277800-45278200 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
13 | chr5:45277800-45278200 | Enhancers | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
14 | chr5:45277800-45279800 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
15 | chr5:45277800-45279800 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
16 | chr5:45278000-45279000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
17 | chr5:45278000-45279800 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
18 | chr5:45278200-45278400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
19 | chr5:45278200-45278400 | Enhancers | H1 Cell Line | embryonic stem cell |
20 | chr5:45278200-45279600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
21 | chr5:45278400-45280400 | Weak transcription | H1 Cell Line | embryonic stem cell |
22 | chr5:45278400-45280600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
23 | chr5:45279000-45279600 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
24 | chr5:45279000-45279600 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
25 | chr5:45279800-45280400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
26 | chr5:45280000-45280600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
27 | chr5:45280200-45280400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
28 | chr5:45280400-45280800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
29 | chr5:45280400-45281400 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
30 | chr5:45280400-45281400 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
31 | chr5:45280600-45280800 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
32 | chr5:45280600-45280800 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
33 | chr5:45281400-45287800 | Weak transcription | H1 Cell Line | embryonic stem cell |
34 | chr5:45284200-45285200 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
35 | chr5:45284600-45284800 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
36 | chr5:45284600-45285000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
37 | chr5:45284600-45285200 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
38 | chr5:45284600-45285400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
39 | chr5:45284800-45288000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
40 | chr5:45285000-45288600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
41 | chr5:45285200-45288400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
42 | chr5:45285200-45288400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
43 | chr5:45285400-45287800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
44 | chr5:45287800-45289000 | Enhancers | H1 Cell Line | embryonic stem cell |
45 | chr5:45287800-45289600 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
46 | chr5:45287800-45289800 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
47 | chr5:45287800-45289800 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
48 | chr5:45288000-45288800 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
49 | chr5:45288000-45289000 | Enhancers | H9 Cell Line | embryonic stem cell |
50 | chr5:45288400-45288800 | Enhancers | ES-I3 Cell Line | embryonic stem cell |