No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs538222041 |
chr1:93298477-93298478 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs544373071 |
chr1:93298490-93298491 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs556666585 |
chr1:93298499-93298500 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs61634219 |
chr1:93298500-93298501 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
5 |
rs538839176 |
chr1:93298515-93298516 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs112010150 |
chr1:93298516-93298517 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs368287683 |
chr1:93298526-93298527 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs372466975 |
chr1:93298576-93298577 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs138346863 |
chr1:93298583-93298584 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs542477366 |
chr1:93298585-93298586 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs369438439 |
chr1:93298608-93298609 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs554425454 |
chr1:93298621-93298622 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs371750521 |
chr1:93298636-93298637 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs374703782 |
chr1:93298645-93298646 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs139405785 |
chr1:93298663-93298664 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs143998608 |
chr1:93298672-93298673 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs145309245 |
chr1:93298679-93298680 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs150664010 |
chr1:93298724-93298725 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs1854796 |
chr1:93298726-93298727 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs566693990 |
chr1:93298741-93298742 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs565031895 |
chr1:93298746-93298747 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs1854797 |
chr1:93298756-93298757 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
23 |
rs534200226 |
chr1:93298769-93298770 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs181631756 |
chr1:93298777-93298778 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs560446482 |
chr1:93298790-93298791 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs527873575 |
chr1:93298818-93298819 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs549727048 |
chr1:93298833-93298834 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs372392388 |
chr1:93298854-93298855 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs555012303 |
chr1:93298864-93298865 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs114860423 |
chr1:93298876-93298877 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs369728038 |
chr1:93298899-93298900 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs373050134 |
chr1:93298903-93298904 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs376462650 |
chr1:93298916-93298917 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs186600450 |
chr1:93298917-93298918 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs571720015 |
chr1:93298921-93298922 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs376226148 |
chr1:93298957-93298958 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs148673599 |
chr1:93298990-93298991 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs56405511 |
chr1:93299005-93299006 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs121434405 |
chr1:93299009-93299010 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs142156224 |
chr1:93299017-93299018 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs370327480 |
chr1:93299049-93299050 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs569054211 |
chr1:93299063-93299064 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs147872195 |
chr1:93299134-93299135 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs150375325 |
chr1:93299169-93299170 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs58263806 |
chr1:93299193-93299194 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs372954310 |
chr1:93299216-93299217 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs565570301 |
chr1:93299279-93299280 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs538004024 |
chr1:93299336-93299337 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs41286817 |
chr1:93299341-93299342 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs80136914 |
chr1:93299394-93299395 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|