Variant report

Variant nsv960862
Chromosome Location chr19:52780307-52785546
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:299 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52774000-52786600 Weak transcription Right Ventricle heart
2 chr19:52774000-52787200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:52774200-52786600 Weak transcription Brain Inferior Temporal Lobe brain
4 chr19:52774200-52797400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr19:52774200-52799600 Weak transcription Hela-S3 cervix
6 chr19:52774400-52781000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr19:52774400-52782000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
8 chr19:52774400-52786600 Weak transcription Osteobl bone
9 chr19:52774400-52787000 Weak transcription HUVEC blood vessel
10 chr19:52774400-52787400 Weak transcription NHDF-Ad bronchial
11 chr19:52774600-52780400 ZNF genes & repeats Primary B cells from cord blood blood
12 chr19:52774600-52781200 ZNF genes & repeats GM12878-XiMat blood
13 chr19:52774600-52782000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
14 chr19:52774600-52782600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
15 chr19:52774600-52783600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
16 chr19:52774600-52783800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
17 chr19:52774600-52786400 Weak transcription Brain Angular Gyrus brain
18 chr19:52774600-52786600 Weak transcription Brain Cingulate Gyrus brain
19 chr19:52774600-52795800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
20 chr19:52774800-52780400 Weak transcription Placenta Amnion Placenta Amnion
21 chr19:52774800-52782400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr19:52774800-52786400 Weak transcription Brain Substantia Nigra brain
23 chr19:52775000-52785400 Weak transcription Gastric stomach
24 chr19:52775000-52786400 Weak transcription Brain Hippocampus Middle brain
25 chr19:52775000-52786400 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr19:52775000-52787400 Weak transcription HepG2 liver
27 chr19:52775200-52786600 Weak transcription Left Ventricle heart
28 chr19:52775600-52780400 ZNF genes & repeats Fetal Brain Female brain
29 chr19:52775600-52781800 ZNF genes & repeats Primary hematopoietic stem cells blood
30 chr19:52775600-52782000 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
31 chr19:52776000-52783600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr19:52776000-52783800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr19:52776800-52781400 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
34 chr19:52777000-52780400 ZNF genes & repeats Primary T cells from cord blood blood
35 chr19:52777000-52782000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
36 chr19:52777200-52782800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr19:52777200-52784800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr19:52777200-52787400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr19:52777200-52794000 Weak transcription Psoas Muscle Psoas
40 chr19:52777400-52786400 Weak transcription Small Intestine intestine
41 chr19:52777400-52787400 Weak transcription Fetal Brain Male brain
42 chr19:52777600-52784800 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr19:52777600-52785400 Weak transcription Adipose Nuclei Adipose
44 chr19:52777600-52786000 Weak transcription NH-A brain
45 chr19:52777600-52786800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr19:52777800-52780400 Strong transcription HUES6 Cell Line embryonic stem cell
47 chr19:52777800-52780800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr19:52777800-52785400 Weak transcription H1 Cell Line embryonic stem cell
49 chr19:52777800-52785600 Weak transcription Stomach Smooth Muscle stomach
50 chr19:52777800-52785800 Weak transcription K562 blood

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