Variant report

Variant nsv961134
Chromosome Location chr18:28612225-28625943
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:345 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:28592600-28614800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr18:28601000-28613800 Weak transcription Esophagus oesophagus
3 chr18:28601000-28620800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr18:28609000-28619400 Weak transcription Placenta Amnion Placenta Amnion
5 chr18:28609800-28612400 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr18:28610400-28613800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr18:28611800-28614200 Weak transcription NHEK skin
8 chr18:28611800-28619200 Weak transcription HMEC breast
9 chr18:28612200-28616000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr18:28612400-28612600 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr18:28613800-28614000 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr18:28613800-28614000 ZNF genes & repeats Esophagus oesophagus
13 chr18:28614000-28615600 Weak transcription Esophagus oesophagus
14 chr18:28614000-28617600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr18:28614200-28614600 Active TSS NHEK skin
16 chr18:28614600-28614800 Flanking Active TSS NHEK skin
17 chr18:28614800-28615200 Enhancers NHEK skin
18 chr18:28614800-28619800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr18:28615200-28615600 Weak transcription NHEK skin
20 chr18:28615600-28617600 Enhancers NHEK skin
21 chr18:28616000-28616400 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr18:28616400-28617400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr18:28617400-28618200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr18:28617600-28617800 Flanking Active TSS NHEK skin
25 chr18:28617600-28618000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr18:28617800-28618000 Enhancers NHEK skin
27 chr18:28618000-28618200 Flanking Active TSS NHEK skin
28 chr18:28618000-28619200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr18:28618200-28618600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr18:28618200-28619200 Enhancers NHEK skin
31 chr18:28618600-28621800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr18:28619200-28619400 Enhancers HMEC breast
33 chr18:28619200-28620600 Flanking Active TSS NHEK skin
34 chr18:28619200-28621400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr18:28619400-28619800 Flanking Active TSS HMEC breast
36 chr18:28619400-28623200 Active TSS Placenta Amnion Placenta Amnion
37 chr18:28619600-28619800 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr18:28619800-28620000 Active TSS HMEC breast
39 chr18:28619800-28623200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr18:28620000-28620200 Flanking Active TSS HMEC breast
41 chr18:28620200-28620800 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
42 chr18:28620200-28623000 Active TSS HMEC breast
43 chr18:28620400-28620600 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
44 chr18:28620400-28620600 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr18:28620400-28620600 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
46 chr18:28620400-28620600 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
47 chr18:28620400-28620800 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
48 chr18:28620400-28620800 Bivalent Enhancer iPS-20b Cell Line embryonic stem cell
49 chr18:28620400-28622400 Active TSS Right Atrium heart
50 chr18:28620400-28623400 Active TSS Breast Myoepithelial Primary Cells Breast

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