Variant report

Variant nsv971949
Chromosome Location chr11:56126625-56344170
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:56143200-56143800 Active TSS Brain Substantia Nigra brain
2 chr11:56156200-56157000 Enhancers Pancreatic Islets Pancreatic Islet
3 chr11:56161200-56162800 Enhancers Fetal Intestine Small intestine
4 chr11:56161200-56163000 Enhancers Fetal Intestine Large intestine
5 chr11:56163600-56164000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr11:56169600-56170000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
7 chr11:56171000-56172400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr11:56171600-56172400 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr11:56173600-56173800 Enhancers Pancreatic Islets Pancreatic Islet
10 chr11:56173800-56175400 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr11:56200400-56200800 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr11:56210000-56210800 Enhancers Fetal Intestine Large intestine
13 chr11:56210800-56211000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr11:56210800-56211200 Weak transcription Fetal Intestine Large intestine
15 chr11:56211200-56211600 Enhancers Fetal Intestine Large intestine
16 chr11:56220800-56221800 Enhancers Fetal Brain Male brain
17 chr11:56222400-56222800 Enhancers iPS-18 Cell Line embryonic stem cell
18 chr11:56223400-56224200 Enhancers HUES48 Cell Line embryonic stem cell
19 chr11:56241400-56243600 Enhancers Fetal Intestine Large intestine
20 chr11:56241800-56243600 Enhancers Fetal Intestine Small intestine
21 chr11:56250200-56250400 Weak transcription Fetal Intestine Large intestine
22 chr11:56250400-56251000 Enhancers Fetal Intestine Small intestine
23 chr11:56250400-56251200 Enhancers Fetal Intestine Large intestine
24 chr11:56251000-56253200 Weak transcription Fetal Intestine Small intestine
25 chr11:56251200-56253600 Weak transcription Fetal Intestine Large intestine
26 chr11:56253200-56256200 Enhancers Fetal Intestine Small intestine
27 chr11:56253600-56256400 Enhancers Fetal Intestine Large intestine
28 chr11:56260400-56261200 Enhancers Fetal Brain Male brain
29 chr11:56261200-56261600 Weak transcription Fetal Brain Male brain
30 chr11:56261600-56261800 Enhancers Fetal Brain Male brain
31 chr11:56261800-56263200 Weak transcription Fetal Brain Male brain
32 chr11:56263200-56263600 Enhancers Fetal Brain Male brain
33 chr11:56269400-56271000 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr11:56271200-56271800 Enhancers Fetal Brain Male brain
35 chr11:56271800-56273000 Weak transcription Fetal Brain Male brain
36 chr11:56273000-56273600 Enhancers Fetal Brain Male brain
37 chr11:56279800-56281400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr11:56292400-56293000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr11:56292600-56293000 Enhancers Fetal Intestine Large intestine
40 chr11:56292600-56293400 Enhancers Sigmoid Colon Sigmoid Colon
41 chr11:56293000-56298400 Weak transcription Fetal Intestine Large intestine
42 chr11:56295200-56295600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr11:56298200-56298400 Enhancers Fetal Intestine Small intestine
44 chr11:56298400-56299400 Weak transcription Fetal Intestine Small intestine
45 chr11:56298400-56302000 Enhancers Fetal Intestine Large intestine
46 chr11:56299400-56301200 Enhancers Fetal Intestine Small intestine
47 chr11:56299800-56300600 Enhancers Colonic Mucosa Colon
48 chr11:56299800-56300600 Enhancers Rectal Mucosa Donor 29 rectum
49 chr11:56299800-56301000 Enhancers Rectal Mucosa Donor 31 rectum
50 chr11:56300400-56300800 Enhancers Sigmoid Colon Sigmoid Colon

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