Variant report

Variant	nsv971950
Chromosome Location	chr11:56344170-56345170
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 72 )
Associated
traits (count: 46 )

Variant overlapped rSNPs/rCNVs (count:72 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12277359	chr11:56344190-56344191	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs11228660	chr11:56344212-56344213	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs369794061	chr11:56344215-56344216	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs371866141	chr11:56344221-56344222	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs375040539	chr11:56344243-56344244	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs369113220	chr11:56344248-56344249	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs10896488	chr11:56344260-56344261	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
8	rs201834242	chr11:56344267-56344268	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs183959126	chr11:56344284-56344285	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs562028599	chr11:56344290-56344291	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs2852413	chr11:56344295-56344296	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs2852414	chr11:56344314-56344315	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs374001292	chr11:56344315-56344316	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs377738338	chr11:56344321-56344322	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs147155596	chr11:56344331-56344332	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs371010116	chr11:56344362-56344363	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs377517152	chr11:56344367-56344368	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs267603010	chr11:56344370-56344371	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs2852415	chr11:56344377-56344378	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs190491292	chr11:56344379-56344380	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs549370764	chr11:56344395-56344396	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs376284744	chr11:56344407-56344408	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs370367751	chr11:56344420-56344421	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs199665621	chr11:56344421-56344422	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs570706007	chr11:56344467-56344468	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs367901011	chr11:56344468-56344469	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs200945406	chr11:56344479-56344480	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs546708835	chr11:56344482-56344483	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs201452553	chr11:56344486-56344487	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs535448751	chr11:56344488-56344489	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs182742553	chr11:56344531-56344532	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs569213559	chr11:56344545-56344546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs537813376	chr11:56344551-56344552	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs539791471	chr11:56344569-56344570	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs2852416	chr11:56344581-56344582	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs376708883	chr11:56344601-56344602	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs369136452	chr11:56344620-56344621	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs371447528	chr11:56344637-56344638	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs573137732	chr11:56344653-56344654	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs200037893	chr11:56344655-56344656	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs566095437	chr11:56344660-56344661	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs369067076	chr11:56344661-56344662	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs555849681	chr11:56344663-56344664	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs574013082	chr11:56344685-56344686	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs544601347	chr11:56344689-56344690	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs374201498	chr11:56344699-56344700	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs376799561	chr11:56344708-56344709	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs140389540	chr11:56344713-56344714	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs201909957	chr11:56344751-56344752	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs186991602	chr11:56344759-56344760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:46)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Renal cell carcinoma	18194544	CNVD
Glioblastoma multiforme	21138945	CNVD
Prostate cancer	18632612	CNVD
Esophageal cancer	21851588	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Myelofibrosis	22110671	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Breast cancer	21364760	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Colorectal cancer	16272173	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Pituitary adenoma	18645599	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:56342200-56345000	Weak transcription	Pancreatic Islets	Pancreatic Islet

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