No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs554217731 |
chr12:10559051-10559052 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs116286070 |
chr12:10559053-10559054 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs148633800 |
chr12:10559111-10559112 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs528680715 |
chr12:10559148-10559149 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs180873424 |
chr12:10559164-10559165 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs74643554 |
chr12:10559185-10559186 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs2617167 |
chr12:10559231-10559232 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
8 |
rs151141996 |
chr12:10559244-10559245 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs576351036 |
chr12:10559301-10559302 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs79936651 |
chr12:10559304-10559305 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs12427017 |
chr12:10559310-10559311 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
12 |
rs575377521 |
chr12:10559348-10559349 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs553412710 |
chr12:10559360-10559361 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs139046330 |
chr12:10559381-10559382 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs542064591 |
chr12:10559408-10559409 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs371690361 |
chr12:10559423-10559424 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs144155723 |
chr12:10559435-10559436 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs114994843 |
chr12:10559447-10559448 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs1154832 |
chr12:10559481-10559482 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs1154831 |
chr12:10559492-10559493 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
21 |
rs563958416 |
chr12:10559504-10559505 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs142131702 |
chr12:10559548-10559549 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs186419031 |
chr12:10559549-10559550 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs544115947 |
chr12:10559550-10559551 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs539817889 |
chr12:10559558-10559559 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs559830898 |
chr12:10559621-10559622 |
Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs528913811 |
chr12:10559624-10559625 |
Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs548376708 |
chr12:10559693-10559694 |
Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs568312373 |
chr12:10559718-10559719 |
Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs531150999 |
chr12:10559797-10559798 |
Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs36057288 |
chr12:10559851-10559852 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs551241650 |
chr12:10559857-10559858 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs11053787 |
chr12:10559914-10559915 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs35103745 |
chr12:10559928-10559929 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs74404007 |
chr12:10559931-10559932 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs539845246 |
chr12:10560020-10560021 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs553060292 |
chr12:10560022-10560023 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs35219249 |
chr12:10560023-10560024 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs80131636 |
chr12:10560062-10560063 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs535907114 |
chr12:10560146-10560147 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs555638676 |
chr12:10560186-10560187 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs2617168 |
chr12:10560188-10560189 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs575492284 |
chr12:10560206-10560207 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs17514000 |
chr12:10560228-10560229 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs542905075 |
chr12:10560284-10560285 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs146324289 |
chr12:10560296-10560297 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs138156966 |
chr12:10560298-10560299 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs146507468 |
chr12:10560323-10560324 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs12308865 |
chr12:10560367-10560368 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs201205058 |
chr12:10560377-10560378 |
Weak transcription Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|