No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs3794982 |
chr19:52096270-52096271 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs569671752 |
chr19:52096277-52096278 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs200135933 |
chr19:52096281-52096282 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs112034079 |
chr19:52096282-52096283 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs140853073 |
chr19:52096300-52096301 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs62113349 |
chr19:52096473-52096474 |
Weak transcription Enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs35478449 |
chr19:52096528-52096529 |
Weak transcription Enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs66517854 |
chr19:52096529-52096530 |
Weak transcription Enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs144743788 |
chr19:52096534-52096535 |
Weak transcription Enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs563054609 |
chr19:52096558-52096559 |
Weak transcription Enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs529682762 |
chr19:52096569-52096570 |
Weak transcription Enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs76165901 |
chr19:52096597-52096598 |
Weak transcription Enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs73934238 |
chr19:52096664-52096665 |
Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
14 |
rs527422071 |
chr19:52096667-52096668 |
Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs62113350 |
chr19:52096677-52096678 |
Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
16 |
rs568282529 |
chr19:52096686-52096687 |
Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs199924066 |
chr19:52096713-52096714 |
Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs137936369 |
chr19:52096721-52096722 |
Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs554374466 |
chr19:52096886-52096887 |
Flanking Active TSS Active TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs186539424 |
chr19:52096898-52096899 |
Flanking Active TSS Active TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs57351606 |
chr19:52096903-52096904 |
Flanking Active TSS Active TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
22 |
rs75095793 |
chr19:52096938-52096939 |
Flanking Active TSS Active TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs188591234 |
chr19:52097021-52097022 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs10412978 |
chr19:52097030-52097031 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
25 |
rs554586616 |
chr19:52097037-52097038 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs572999200 |
chr19:52097058-52097059 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs540747380 |
chr19:52097060-52097061 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs375518956 |
chr19:52097062-52097063 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs142784941 |
chr19:52097065-52097066 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs557864691 |
chr19:52097113-52097114 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs577331635 |
chr19:52097139-52097140 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs372994959 |
chr19:52097150-52097151 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs544498447 |
chr19:52097176-52097177 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs7253296 |
chr19:52097177-52097178 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
35 |
rs575219410 |
chr19:52097195-52097196 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs58301181 |
chr19:52097261-52097262 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
37 |
rs560236288 |
chr19:52097300-52097301 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs527367236 |
chr19:52097343-52097344 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs562177349 |
chr19:52097390-52097391 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs151333477 |
chr19:52097397-52097398 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs35740364 |
chr19:52097401-52097402 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
42 |
rs564048421 |
chr19:52097413-52097414 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs200953422 |
chr19:52097433-52097434 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs549721174 |
chr19:52097452-52097453 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs7252645 |
chr19:52097461-52097462 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
46 |
rs535407612 |
chr19:52097509-52097510 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs548154874 |
chr19:52097549-52097550 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs141848717 |
chr19:52097560-52097561 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs566559410 |
chr19:52097572-52097573 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs7252767 |
chr19:52097586-52097587 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|