Variant report

Variant	nsv978328
Chromosome Location	chr16:81166830-81197232
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:472)
CpG islands
(count:244)
Chromatin interactive
region (count:28)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:472 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr16:81175001-81175341	K562	blood:	n/a	n/a
2	BACH1	chr16:81189210-81189228	K562	blood:	n/a	n/a
3	BACH1	chr16:81174746-81175382	H1-hESC	embryonic stem cell:	n/a	n/a
4	BATF	chr16:81168205-81168486	GM12878	blood:	n/a	n/a
5	BCL11A	chr16:81168284-81168501	GM12878	blood:	n/a	n/a
6	BHLHE40	chr16:81170261-81170322	K562	blood:	n/a	chr16:81170312-81170321
7	BHLHE40	chr16:81170170-81170518	HepG2	liver:	n/a	chr16:81170312-81170321
8	CBX3	chr16:81177298-81178299	HCT-116	colon:	n/a	n/a
9	CBX3	chr16:81177278-81178302	HCT-116	colon:	n/a	n/a
10	CBX3	chr16:81174969-81175313	K562	blood:	n/a	n/a
11	CEBPB	chr16:81177444-81178184	Hela-S3	cervix:	n/a	n/a
12	CEBPB	chr16:81175032-81175221	H1-hESC	embryonic stem cell:	n/a	n/a
13	CEBPB	chr16:81175038-81175238	HepG2	liver:	n/a	n/a
14	CEBPB	chr16:81180062-81180209	HepG2	liver:	n/a	n/a
15	CEBPB	chr16:81177379-81178318	MCF-7	breast:	n/a	n/a
16	CEBPB	chr16:81177405-81178293	HCT-116	colon:	n/a	n/a
17	CEBPB	chr16:81172505-81172638	K562	blood:	n/a	n/a
18	CEBPB	chr16:81177354-81178428	HCT-116	colon:	n/a	n/a
19	CEBPB	chr16:81179993-81180304	HepG2	liver:	n/a	n/a
20	CEBPB	chr16:81177423-81178286	MCF-7	breast:	n/a	n/a
21	CHD2	chr16:81175179-81175253	K562	blood:	n/a	n/a
22	CHD2	chr16:81174697-81174833	HepG2	liver:	n/a	n/a
23	CREB1	chr16:81174880-81175333	A549	lung:	n/a	n/a
24	CTCF	chr16:81189560-81189710	HCT-116	colon:	n/a	n/a
25	CTCF	chr16:81189436-81189614	MCF-7	breast:	n/a	n/a
26	CTCF	chr16:81175080-81175230	HFF	foreskin:	n/a	n/a
27	CTCF	chr16:81175148-81175308	GM13977	blood:	n/a	n/a
28	CTCF	chr16:81176600-81176750	HepG2	liver:	n/a	n/a
29	CTCF	chr16:81175180-81175330	GM12874	blood:	n/a	n/a
30	CTCF	chr16:81175100-81175250	GM12868	blood:	n/a	n/a
31	CTCF	chr16:81170160-81170310	A549	lung:	n/a	n/a
32	CTCF	chr16:81189480-81189630	GM12878	blood:	n/a	n/a
33	CTCF	chr16:81176600-81176750	NHEK	skin:	n/a	n/a
34	CTCF	chr16:81172870-81173049	IMR90	lung:	n/a	n/a
35	CTCF	chr16:81175080-81175230	HEEpiC	esophagus:	n/a	n/a
36	CTCF	chr16:81175044-81175341	H1-hESC	embryonic stem cell:	n/a	n/a
37	CTCF	chr16:81172940-81173090	MCF-7	breast:	n/a	n/a
38	CTCF	chr16:81175075-81175348	MCF-7	breast:	n/a	n/a
39	CTCF	chr16:81175160-81175310	SK-N-SH_RA	brain:	n/a	n/a
40	CTCF	chr16:81175120-81175270	HUVEC	blood vessel:	n/a	n/a
41	CTCF	chr16:81175140-81175290	HCPEpiC	choroid plexus:	n/a	n/a
42	CTCF	chr16:81175180-81175330	GM12865	blood:	n/a	n/a
43	CTCF	chr16:81175140-81175290	GM12871	blood:	n/a	n/a
44	CTCF	chr16:81175022-81175400	K562	blood:	n/a	n/a
45	CTCF	chr16:81175180-81175330	GM06990	blood:	n/a	n/a
46	CTCF	chr16:81172918-81173026	K562	blood:	n/a	n/a
47	CTCF	chr16:81175060-81175210	HMEC	breast:	n/a	n/a
48	CTCF	chr16:81175100-81175250	NB4	blood:	n/a	n/a
49	CTCF	chr16:81189420-81189570	GM12869	blood:	n/a	n/a
50	CTCF	chr16:81175140-81175290	AG09319	gingival:	n/a	n/a

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr16:81190547-81190597	Jurkat	blood:	n/a
2	chr16:81190494-81190544	AoSMC	blood vessel:	n/a
3	chr16:81190494-81190544	HepG2	liver:	n/a
4	chr16:81190547-81190597	HRPEpiC	eye:	n/a
5	chr16:81190494-81190544	AG09319	gingival:	n/a
6	chr16:81190494-81190544	IMR90	lung:	fetal
7	chr16:81190547-81190597	SKMC	muscle:	n/a
8	chr16:81190750-81190800	HRE	kidney:	n/a
9	chr16:81190750-81190800	NHDF-neo	bronchial:	n/a
10	chr16:81170527-81170577	AG04449	skin:	fetal
11	chr16:81190547-81190597	HUVEC	blood vessel:	n/a
12	chr16:81190547-81190597	HCT-116	colon:	n/a
13	chr16:81190494-81190544	BE2_C	brain:	n/a
14	chr16:81190750-81190800	HCPEpiC	choroid plexus:	n/a
15	chr16:81170527-81170577	GM12891	blood:	n/a
16	chr16:81170527-81170577	LNCaP	prostate:	n/a
17	chr16:81190750-81190800	GM12878	blood:	n/a
18	chr16:81170527-81170577	NHBE	bronchial:	n/a
19	chr16:81190494-81190544	AG09309	skin:	n/a
20	chr16:81190547-81190597	Caco-2	colon:	n/a
21	chr16:81170527-81170577	HL-60	blood:	n/a
22	chr16:81170527-81170577	SAEC	small airway:	n/a
23	chr16:81190547-81190597	NT2-D1	testis:	n/a
24	chr16:81190750-81190800	HRCEpiC	kidney:	n/a
25	chr16:81190750-81190800	SKMC	muscle:	n/a
26	chr16:81190547-81190597	HNPCEpiC	eye:	n/a
27	chr16:81170527-81170577	HRE	kidney:	n/a
28	chr16:81190494-81190544	SKMC	muscle:	n/a
29	chr16:81190494-81190544	NHDF-neo	bronchial:	n/a
30	chr16:81190750-81190800	NT2-D1	testis:	n/a
31	chr16:81190750-81190800	PFSK-1	brain:	n/a
32	chr16:81190547-81190597	AG04450	lung:	fetal
33	chr16:81170527-81170577	HRPEpiC	eye:	n/a
34	chr16:81190750-81190800	HMEC	breast:	n/a
35	chr16:81190494-81190544	ovcar-3	ovarian:	n/a
36	chr16:81190547-81190597	GM06990	blood:	n/a
37	chr16:81190750-81190800	SAEC	small airway:	n/a
38	chr16:81170527-81170577	SK-N-SH_RA	brain:	n/a
39	chr16:81190494-81190544	GM12891	blood:	n/a
40	chr16:81190547-81190597	HEEpiC	esophagus:	n/a
41	chr16:81190494-81190544	U87	brain:	n/a
42	chr16:81190547-81190597	BE2_C	brain:	n/a
43	chr16:81170527-81170577	T-47D	breast:	n/a
44	chr16:81190547-81190597	HCF	heart:	n/a
45	chr16:81190494-81190544	HCT-116	colon:	n/a
46	chr16:81190750-81190800	HPAEpiC	pulmonary alveolar:	n/a
47	chr16:81190547-81190597	MCF10A-Er-Src	breast:	n/a
48	chr16:81190547-81190597	AG09319	gingival:	n/a
49	chr16:81190547-81190597	ProgFib	skin:	n/a
50	chr16:81170527-81170577	NT2-D1	testis:	n/a

(count:28 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr16:81191490..81193382-chr16:81194384..81196208,2	MCF-7	breast:
2	chr16:81189500..81193417-chr16:81196908..81199749,3	K562	blood:
3	chr16:81189500..81193417-chr16:81196908..81199749,3	K562	blood:
4	chr16:81128511..81130849-chr16:81169835..81172966,4	MCF-7	breast:
5	chr16:81110384..81110935-chr16:81169785..81170782,2	MCF-7	breast:
6	chr16:81170203..81172478-chr16:81173151..81175133,2	MCF-7	breast:
7	chr16:81181423..81183511-chr16:81191451..81193447,2	MCF-7	breast:
8	chr16:81167266..81170181-chr16:81212814..81215037,2	MCF-7	breast:
9	chr16:71843029..71844532-chr16:81169189..81171698,2	MCF-7	breast:
10	chr16:81174893..81175517-chr16:81231737..81232731,3	MCF-7	breast:
11	chr16:81172499..81173473-chr16:81231950..81233302,5	MCF-7	breast:
12	chr16:81068953..81069797-chr16:81176232..81177093,2	K562	blood:
13	chr16:81068969..81069788-chr16:81189009..81189664,3	MCF-7	breast:
14	chr16:81068581..81070765-chr16:81177689..81179201,2	MCF-7	breast:
15	chr16:81191490..81193382-chr16:81194384..81196208,2	MCF-7	breast:
16	chr16:81187279..81187784-chr16:81232060..81232954,2	MCF-7	breast:
17	chr16:81187277..81187855-chr16:81231986..81232826,2	MCF-7	breast:
18	chr16:81172576..81173403-chr16:81248138..81248840,3	MCF-7	breast:
19	chr16:81176050..81179014-chr16:81206703..81209353,3	MCF-7	breast:
20	chr16:81194645..81197115-chr16:81199955..81201800,2	MCF-7	breast:
21	chr16:81168888..81171592-chr16:81175504..81177098,2	MCF-7	breast:
22	chr16:81159689..81161686-chr16:81165248..81167111,2	MCF-7	breast:
23	chr16:81177157..81179228-chr16:81223964..81225695,2	MCF-7	breast:
24	chr16:81078751..81080848-chr16:81181095..81182686,2	K562	blood:
25	chr16:81177178..81179005-chr16:81180841..81182912,2	MCF-7	breast:
26	chr16:81177178..81179005-chr16:81180841..81182912,2	MCF-7	breast:
27	chr16:81165301..81167307-chr16:81169163..81170985,2	MCF-7	breast:
28	chr16:81181423..81183511-chr16:81191451..81193447,2	MCF-7	breast:

No data

Variant related genes	Relation type
PKD1L2	TF binding region
PKD1L2	CpG island
ENSG00000260213	chromatin interactions
ENSG00000245059	chromatin interactions
ENSG00000166747	chromatin interactions
ENSG00000166473	chromatin interactions
ENSG00000166454	chromatin interactions
ENSG00000140905	chromatin interactions
ENSG00000166455	chromatin interactions

Extended variants
information (count: 2174 )
Associated
traits (count: 71 )

Variant overlapped rSNPs/rCNVs (count:2174 , 50 per page) page: 1 2 3 4 5 6 7 ... 44

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs140981472	chr16:81166837-81166838	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs150223060	chr16:81166838-81166839	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs530038244	chr16:81166862-81166863	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs35153628	chr16:81166890-81166891	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs548203977	chr16:81166896-81166897	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs376073450	chr16:81166903-81166904	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs145694208	chr16:81166910-81166911	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs531599757	chr16:81166937-81166938	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs549722750	chr16:81166945-81166946	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs181051489	chr16:81166947-81166948	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs538741507	chr16:81166957-81166958	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs141545615	chr16:81166960-81166961	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs566123305	chr16:81166963-81166964	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs184987723	chr16:81166998-81166999	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs554968178	chr16:81167009-81167010	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs191012179	chr16:81167010-81167011	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs183286161	chr16:81167038-81167039	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs560550015	chr16:81167047-81167048	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs558585953	chr16:81167081-81167082	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs577040668	chr16:81167085-81167086	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs541112595	chr16:81167088-81167089	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs552999875	chr16:81167103-81167104	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs186085302	chr16:81167122-81167123	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs371019609	chr16:81167141-81167142	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs375554478	chr16:81167147-81167148	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs370700188	chr16:81167148-81167149	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs373810945	chr16:81167149-81167150	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs200754761	chr16:81167151-81167152	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs371248374	chr16:81167179-81167180	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs200411900	chr16:81167213-81167214	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs368524278	chr16:81167231-81167232	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs146070119	chr16:81167233-81167234	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs563443921	chr16:81167235-81167236	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs190543705	chr16:81167240-81167241	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs200325482	chr16:81167241-81167242	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs543458611	chr16:81167243-81167244	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs369386792	chr16:81167248-81167249	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs551810741	chr16:81167263-81167264	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs372071366	chr16:81167268-81167269	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs76554762	chr16:81167269-81167270	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs369181742	chr16:81167278-81167279	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs547588970	chr16:81167282-81167283	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs373073261	chr16:81167295-81167296	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs377745849	chr16:81167298-81167299	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs115527276	chr16:81167309-81167310	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs3826050	chr16:81167314-81167315	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs570412236	chr16:81167323-81167324	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs377326398	chr16:81167327-81167328	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs370650471	chr16:81167332-81167333	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs537721692	chr16:81167338-81167339	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:71)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	22958593	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16702952	CNVD
Medulloblastoma	16968546	CNVD
Prostate cancer	19242612	CNVD
Cancer	22429812	CNVD
Ewing''s sarcoma	21437220	CNVD
Ewing''s sarcoma	22429812	CNVD
Melanoma	18172304	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Multiple myeloma	21628407	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	17001317	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17603634	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	17245344	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21806811	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	21965145	CNVD
Cancer	21183584	CNVD
Ovarian cancer	20844748	CNVD
Lung cancer	18438408	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	21509527	CNVD
Breast cancer	21364760	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Autism	21865298	CNVD
Myelofibrosis	22110671	CNVD
Non-small cell lung cancer	21829676	CNVD
Neuroblastoma	18923524	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Obesity	20622171	CNVD
Cancer	20164920	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Bipolar disorder	19114987	CNVD

Chromatin state (count:318 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:81130000-81187600	Weak transcription	Right Atrium	heart
2	chr16:81141200-81169600	Weak transcription	Brain Anterior Caudate	brain
3	chr16:81141400-81169600	Weak transcription	Brain Cingulate Gyrus	brain
4	chr16:81141400-81169600	Weak transcription	Brain Hippocampus Middle	brain
5	chr16:81151400-81173000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr16:81154000-81198800	Weak transcription	Right Ventricle	heart
7	chr16:81154400-81169800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr16:81155400-81174600	Weak transcription	Left Ventricle	heart
9	chr16:81158200-81169800	Weak transcription	A549	lung
10	chr16:81161600-81169800	Weak transcription	Ovary	ovary
11	chr16:81162000-81169600	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr16:81162000-81169800	Weak transcription	HepG2	liver
13	chr16:81162200-81169600	Weak transcription	Adipose Nuclei	Adipose
14	chr16:81163800-81170600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
15	chr16:81164400-81167200	Weak transcription	Placenta	Placenta
16	chr16:81164600-81167200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr16:81165800-81174800	Weak transcription	Spleen	Spleen
18	chr16:81166200-81169800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr16:81166800-81169600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
20	chr16:81167200-81167400	Enhancers	Brain Inferior Temporal Lobe	brain
21	chr16:81167200-81167600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr16:81167200-81181000	Enhancers	Placenta	Placenta
23	chr16:81167400-81169600	Weak transcription	Brain Inferior Temporal Lobe	brain
24	chr16:81167600-81168800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr16:81168400-81169000	Enhancers	GM12878-XiMat	blood
26	chr16:81168800-81174000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr16:81169600-81169800	Enhancers	Brain Inferior Temporal Lobe	brain
28	chr16:81169600-81169800	Enhancers	Brain Substantia Nigra	brain
29	chr16:81169600-81170000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr16:81169600-81170200	Enhancers	Brain Angular Gyrus	brain
31	chr16:81169600-81170200	Enhancers	Brain Anterior Caudate	brain
32	chr16:81169600-81170400	Enhancers	Brain Hippocampus Middle	brain
33	chr16:81169600-81170400	Enhancers	Skeletal Muscle Male	skeletal muscle
34	chr16:81169600-81170600	Enhancers	Brain Cingulate Gyrus	brain
35	chr16:81169600-81171200	Enhancers	Fetal Brain Female	brain
36	chr16:81169600-81171600	Enhancers	Brain Germinal Matrix	brain
37	chr16:81169600-81171600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
38	chr16:81169600-81171800	Enhancers	Cortex derived primary cultured neurospheres	brain
39	chr16:81169600-81171800	Enhancers	Fetal Brain Male	brain
40	chr16:81169600-81173400	Enhancers	Adipose Nuclei	Adipose
41	chr16:81169800-81170000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr16:81169800-81170000	Flanking Active TSS	Brain Substantia Nigra	brain
43	chr16:81169800-81170000	Enhancers	Esophagus	oesophagus
44	chr16:81169800-81170200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr16:81169800-81170200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr16:81169800-81170200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr16:81169800-81170200	Enhancers	NHDF-Ad	bronchial
48	chr16:81169800-81170400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr16:81169800-81170600	Enhancers	HepG2	liver
50	chr16:81169800-81170800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links