No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs567428193 |
chr2:55872760-55872761 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs536073867 |
chr2:55872773-55872774 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs537153019 |
chr2:55872802-55872803 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs375573214 |
chr2:55872805-55872806 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs555791982 |
chr2:55872811-55872812 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs557048745 |
chr2:55872821-55872822 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs569256777 |
chr2:55872829-55872830 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs190334535 |
chr2:55872867-55872868 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs558176600 |
chr2:55872868-55872869 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs111417048 |
chr2:55872895-55872896 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs578097243 |
chr2:55872951-55872952 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs182552486 |
chr2:55872959-55872960 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs10579642 |
chr2:55872970-55872971 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs372055700 |
chr2:55872973-55872974 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs373760696 |
chr2:55872982-55872983 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs554189518 |
chr2:55872983-55872984 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs574141121 |
chr2:55872988-55872989 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs56098806 |
chr2:55873003-55873004 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
19 |
rs115885599 |
chr2:55873014-55873015 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs185454395 |
chr2:55873015-55873016 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs189764193 |
chr2:55873020-55873021 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs542479888 |
chr2:55873025-55873026 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs376830693 |
chr2:55873065-55873066 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs151279726 |
chr2:55873066-55873067 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs547255567 |
chr2:55873106-55873107 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs112074939 |
chr2:55873123-55873124 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs529851526 |
chr2:55873124-55873125 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs549706786 |
chr2:55873188-55873189 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs2627777 |
chr2:55873215-55873216 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
30 |
rs374668261 |
chr2:55873240-55873241 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs538330090 |
chr2:55873241-55873242 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs2627776 |
chr2:55873301-55873302 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
33 |
rs564283200 |
chr2:55873314-55873315 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs72805494 |
chr2:55873357-55873358 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
35 |
rs373001216 |
chr2:55873368-55873369 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs376678994 |
chr2:55873371-55873372 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs7584120 |
chr2:55873385-55873386 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
38 |
rs574251894 |
chr2:55873407-55873408 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs373628268 |
chr2:55873414-55873415 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs75290562 |
chr2:55873418-55873419 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs149843729 |
chr2:55873456-55873457 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs377606902 |
chr2:55873492-55873493 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs149526231 |
chr2:55873530-55873531 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs146554440 |
chr2:55873592-55873593 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs202190573 |
chr2:55873605-55873606 |
Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs544680155 |
chr2:55873644-55873645 |
Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs575493662 |
chr2:55873751-55873752 |
Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs184093082 |
chr2:55873766-55873767 |
Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs189023901 |
chr2:55873894-55873895 |
Weak transcription Strong transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs144441419 |
chr2:55873909-55873910 |
Weak transcription Strong transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|