Variant report

Variant nsv979524
Chromosome Location chr21:15431964-15441809
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:15401800-15452000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr21:15402600-15442400 Weak transcription Dnd41 blood
3 chr21:15423000-15442200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr21:15423400-15455600 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr21:15423600-15443000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr21:15425800-15443400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr21:15427000-15432000 ZNF genes & repeats Fetal Stomach stomach
8 chr21:15427000-15433000 ZNF genes & repeats Fetal Brain Female brain
9 chr21:15427200-15436200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr21:15428200-15436000 Weak transcription Right Atrium heart
11 chr21:15428800-15432200 ZNF genes & repeats Brain Germinal Matrix brain
12 chr21:15428800-15449000 Weak transcription Fetal Lung lung
13 chr21:15429200-15433800 Weak transcription Thymus Thymus
14 chr21:15429200-15436000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr21:15429400-15436000 Weak transcription Pancreas Pancrea
16 chr21:15430400-15432600 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr21:15430400-15433400 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr21:15430400-15442400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr21:15431000-15436000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr21:15431200-15436000 Weak transcription Stomach Smooth Muscle stomach
21 chr21:15431200-15436200 Weak transcription Aorta Aorta
22 chr21:15431400-15432000 Genic enhancers Esophagus oesophagus
23 chr21:15431400-15434200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr21:15431400-15434600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr21:15431800-15432000 Strong transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr21:15431800-15432000 Strong transcription Ovary ovary
27 chr21:15431800-15432600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr21:15431800-15432600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr21:15431800-15432600 Weak transcription Gastric stomach
30 chr21:15432000-15435400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr21:15432000-15435400 Weak transcription Ovary ovary
32 chr21:15432000-15435800 Weak transcription Esophagus oesophagus
33 chr21:15432600-15432800 ZNF genes & repeats Brain Germinal Matrix brain
34 chr21:15432600-15433000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr21:15432600-15433000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
36 chr21:15432600-15433000 ZNF genes & repeats Fetal Stomach stomach
37 chr21:15432600-15433000 Enhancers Gastric stomach
38 chr21:15433000-15434000 Weak transcription Fetal Brain Female brain
39 chr21:15433000-15436400 Weak transcription Gastric stomach
40 chr21:15433000-15442200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr21:15433000-15442400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr21:15434000-15437600 ZNF genes & repeats Fetal Brain Female brain
43 chr21:15434600-15437000 ZNF genes & repeats Brain Germinal Matrix brain
44 chr21:15435400-15435600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
45 chr21:15435400-15436600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr21:15435600-15436800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
47 chr21:15435600-15436800 ZNF genes & repeats Fetal Stomach stomach
48 chr21:15435800-15436800 Active TSS iPS-18 Cell Line embryonic stem cell
49 chr21:15435800-15437200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr21:15435800-15438400 Active TSS Esophagus oesophagus

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