Variant report

Variant nsv997545
Chromosome Location chr1:196788974-196916787
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:204 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:196788000-196789200 Weak transcription Liver Liver
2 chr1:196789200-196790400 Active TSS Liver Liver
3 chr1:196790400-196791200 Weak transcription Liver Liver
4 chr1:196791200-196793000 Active TSS Liver Liver
5 chr1:196793000-196793400 Flanking Active TSS Liver Liver
6 chr1:196793400-196793600 Enhancers Liver Liver
7 chr1:196793400-196793600 Enhancers Gastric stomach
8 chr1:196793600-196794200 Weak transcription Liver Liver
9 chr1:196794200-196795000 Enhancers Liver Liver
10 chr1:196795000-196796000 Weak transcription Liver Liver
11 chr1:196796000-196796600 Enhancers Liver Liver
12 chr1:196796600-196799400 Weak transcription Liver Liver
13 chr1:196797000-196797400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:196797200-196797800 Active TSS Ovary ovary
15 chr1:196797600-196799800 Active TSS Muscle Satellite Cultured Cells --
16 chr1:196799200-196799600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr1:196818000-196819600 Enhancers Liver Liver
18 chr1:196846800-196847000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:196846800-196847400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:196846800-196847600 Active TSS Fetal Brain Female brain
21 chr1:196847000-196847200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
22 chr1:196847000-196847200 Bivalent Enhancer Colon Smooth Muscle Colon
23 chr1:196847000-196847200 Enhancers Fetal Brain Male brain
24 chr1:196847000-196847200 Active TSS Psoas Muscle Psoas
25 chr1:196847000-196847200 Active TSS A549 lung
26 chr1:196847000-196847400 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
27 chr1:196847000-196847400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
28 chr1:196847000-196847400 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:196847000-196847400 Active TSS Muscle Satellite Cultured Cells --
30 chr1:196847000-196847400 Active TSS Liver Liver
31 chr1:196847000-196847400 Active TSS Brain Anterior Caudate brain
32 chr1:196847000-196847400 Bivalent Enhancer Brain Hippocampus Middle brain
33 chr1:196847000-196847400 Active TSS Osteobl bone
34 chr1:196847000-196847600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
35 chr1:196847000-196847600 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
36 chr1:196847000-196847600 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
37 chr1:196847000-196847600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:196847000-196847600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:196847000-196847600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:196847000-196847600 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:196847000-196847600 Active TSS Brain Germinal Matrix brain
42 chr1:196847200-196847400 Active TSS H9 Cell Line embryonic stem cell
43 chr1:196847200-196847400 Bivalent/Poised TSS H9 Derived Neuron Cultured Cells ES cell derived
44 chr1:196847200-196847400 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
45 chr1:196847200-196847400 Bivalent Enhancer Esophagus oesophagus
46 chr1:196847200-196847400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
47 chr1:196847200-196847400 Bivalent/Poised TSS Fetal Heart heart
48 chr1:196847200-196847400 Active TSS Fetal Lung lung
49 chr1:196847200-196847400 Flanking Active TSS Psoas Muscle Psoas
50 chr1:196847200-196847400 Enhancers Right Ventricle heart

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