Variant report

Variant nsv998899
Chromosome Location chr1:225210813-225496353
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:321 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225204000-225217400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:225205600-225215600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr1:225205600-225235600 Weak transcription Pancreas Pancrea
4 chr1:225211200-225226800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr1:225212800-225213000 ZNF genes & repeats Primary hematopoietic stem cells blood
6 chr1:225213000-225215200 Weak transcription Primary hematopoietic stem cells blood
7 chr1:225214000-225214200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr1:225214200-225214400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr1:225214400-225216400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr1:225215200-225215600 ZNF genes & repeats Primary hematopoietic stem cells blood
11 chr1:225215200-225215800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:225215600-225242200 Weak transcription Primary hematopoietic stem cells blood
13 chr1:225223000-225223600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr1:225223400-225236000 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr1:225225200-225232000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:225225400-225228000 Weak transcription Fetal Kidney kidney
17 chr1:225226600-225227000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:225226600-225227000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:225226800-225227000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:225227000-225228600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr1:225227000-225238400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:225227000-225240200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:225228000-225231000 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr1:225228600-225229400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:225231600-225232600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:225232000-225232800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:225232200-225232600 Enhancers Fetal Lung lung
28 chr1:225238200-225238600 Weak transcription Pancreas Pancrea
29 chr1:225238400-225238600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:225238600-225238800 ZNF genes & repeats Pancreas Pancrea
31 chr1:225248800-225249400 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr1:225255600-225260400 Weak transcription Pancreas Pancrea
33 chr1:225256400-225277400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr1:225257000-225257400 Enhancers Muscle Satellite Cultured Cells --
35 chr1:225257000-225262600 Weak transcription A549 lung
36 chr1:225257200-225257400 Enhancers Hela-S3 cervix
37 chr1:225257400-225260600 Weak transcription Hela-S3 cervix
38 chr1:225258000-225264200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:225258400-225259400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:225259000-225263000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
41 chr1:225259200-225259800 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
42 chr1:225259400-225262000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:225259800-225264600 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr1:225260200-225260800 ZNF genes & repeats Ovary ovary
45 chr1:225260200-225261000 ZNF genes & repeats Primary hematopoietic stem cells blood
46 chr1:225260200-225261200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr1:225260400-225260800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr1:225260400-225261200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
49 chr1:225260400-225261200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
50 chr1:225260400-225261200 Strong transcription Pancreas Pancrea

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