The 2.0 version of rSNPBase

Variant report

Variant rs10067509
Chromosome Location chr5:167655796-167655797
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:167621400-167657600 Weak transcription Fetal Brain Female brain
2 chr5:167646200-167661200 Weak transcription HMEC breast
3 chr5:167646200-167674000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr5:167646600-167664600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr5:167646800-167658200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr5:167646800-167672000 Weak transcription Brain Anterior Caudate brain
7 chr5:167646800-167674000 Weak transcription Brain Inferior Temporal Lobe brain
8 chr5:167646800-167695800 Weak transcription Brain Cingulate Gyrus brain
9 chr5:167647000-167657000 Weak transcription Fetal Brain Male brain
10 chr5:167647000-167661200 Strong transcription NHEK skin
11 chr5:167647200-167673600 Weak transcription Fetal Lung lung
12 chr5:167648600-167660600 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr5:167649800-167660800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr5:167650800-167658800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr5:167651800-167659400 Weak transcription HSMMtube muscle
16 chr5:167651800-167661000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr5:167652200-167656200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr5:167652200-167656600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr5:167653000-167655800 Genic enhancers Left Ventricle heart
20 chr5:167653600-167656400 Strong transcription HSMM muscle
21 chr5:167653600-167656600 Enhancers Primary monocytes fromperipheralblood blood
22 chr5:167654000-167655800 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr5:167654000-167655800 Enhancers Primary T helper cells fromperipheralblood blood
24 chr5:167654200-167661000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr5:167654400-167658000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr5:167654600-167655800 Enhancers Right Atrium heart
27 chr5:167654600-167656400 Enhancers HUVEC blood vessel
28 chr5:167654800-167655800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr5:167654800-167655800 Enhancers Primary T killer naive cells fromperipheralblood blood
30 chr5:167654800-167655800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr5:167654800-167655800 Flanking Active TSS GM12878-XiMat blood
32 chr5:167655200-167656200 Weak transcription Lung lung
33 chr5:167655400-167655800 Enhancers Primary T cells from cord blood blood
34 chr5:167655600-167655800 Enhancers Primary T cells fromperipheralblood blood
35 chr5:167655600-167655800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
36 chr5:167655600-167655800 Enhancers Primary T helper cells PMA-I stimulated --
37 chr5:167655600-167655800 Enhancers Monocytes-CD14+_RO01746 blood
38 chr5:167655600-167656000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr5:167655600-167656800 Enhancers Primary Natural Killer cells fromperipheralblood blood
40 chr5:167655600-167669000 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015