Variant report
Variant | rs10096381 |
---|---|
Chromosome Location | chr8:10813904-10813905 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
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(count:3 , 50 per page) page:
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rs_ID | r2[population] |
---|---|
rs10087923 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs10088408 | 0.83[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs10089518 | 0.81[CEU][hapmap] |
rs10096421 | 0.89[CEU][hapmap];0.88[EUR][1000 genomes] |
rs10096511 | 0.89[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs10111950 | 0.88[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs11250093 | 0.81[CEU][hapmap] |
rs11250097 | 0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs11250098 | 0.89[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs11250099 | 0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs12542037 | 0.84[CEU][hapmap] |
rs34031674 | 0.81[ASN][1000 genomes] |
rs34738102 | 0.83[EUR][1000 genomes] |
rs35910832 | 0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs4240673 | 0.81[CEU][hapmap] |
rs4314618 | 0.86[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs4451266 | 0.82[EUR][1000 genomes] |
rs4451267 | 0.83[EUR][1000 genomes] |
rs4841465 | 0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs4841466 | 0.85[EUR][1000 genomes] |
rs6601544 | 0.85[CEU][hapmap];0.83[EUR][1000 genomes] |
rs6984496 | 0.81[CEU][hapmap] |
rs6996943 | 0.84[CEU][hapmap];0.83[EUR][1000 genomes] |
rs7001456 | 0.82[CHB][hapmap] |
rs7010262 | 0.83[EUR][1000 genomes] |
rs7010719 | 0.83[EUR][1000 genomes] |
rs7011106 | 0.82[EUR][1000 genomes] |
rs7011268 | 0.83[EUR][1000 genomes] |
rs7013277 | 1.00[CHB][hapmap] |
rs7014861 | 0.82[EUR][1000 genomes] |
rs73196860 | 0.87[ASN][1000 genomes] |
rs7821914 | 0.82[JPT][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv917085 | chr8:10237508-10828204 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 37 gene(s) | inside rSNPs | diseases |
2 | nsv522127 | chr8:10797831-10815515 | Weak transcription Enhancers Bivalent Enhancer Genic enhancers | Chromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
3 | nsv521721 | chr8:10802102-10836472 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
4 | nsv519822 | chr8:10803617-10815515 | Weak transcription Enhancers Bivalent Enhancer Genic enhancers | Chromatin interactive region | n/a | inside rSNPs | diseases |
5 | nsv518360 | chr8:10805015-10816873 | Enhancers Bivalent Enhancer Weak transcription Genic enhancers | Chromatin interactive region | n/a | inside rSNPs | diseases |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:10807400-10818200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
2 | chr8:10810400-10818200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |