Variant report

Variant	rs10098637
Chromosome Location	chr8:10143622-10143623
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10086995	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10098384	1.00[ASN][1000 genomes]
rs10101698	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10111805	1.00[ASN][1000 genomes]
rs11249991	1.00[ASN][1000 genomes]
rs11774051	1.00[ASN][1000 genomes]
rs11778030	1.00[ASN][1000 genomes]
rs11784828	1.00[EUR][1000 genomes]
rs13258224	1.00[EUR][1000 genomes]
rs13280593	1.00[EUR][1000 genomes]
rs17151609	1.00[ASN][1000 genomes]
rs17151819	1.00[EUR][1000 genomes]
rs17151838	1.00[EUR][1000 genomes]
rs17151840	1.00[EUR][1000 genomes]
rs17151867	1.00[EUR][1000 genomes]
rs17151871	1.00[EUR][1000 genomes]
rs17151875	1.00[EUR][1000 genomes]
rs17151882	1.00[EUR][1000 genomes]
rs2004677	1.00[ASN][1000 genomes]
rs2004679	1.00[ASN][1000 genomes]
rs28399330	1.00[ASN][1000 genomes]
rs28526848	1.00[ASN][1000 genomes]
rs28602752	1.00[ASN][1000 genomes]
rs28707596	1.00[ASN][1000 genomes]
rs2975689	1.00[ASN][1000 genomes]
rs2975704	1.00[ASN][1000 genomes]
rs2975705	1.00[ASN][1000 genomes]
rs4840477	1.00[EUR][1000 genomes]
rs4841316	1.00[EUR][1000 genomes]
rs4841325	1.00[ASN][1000 genomes]
rs55836840	1.00[ASN][1000 genomes]
rs59767984	1.00[EUR][1000 genomes]
rs59983936	1.00[EUR][1000 genomes]
rs60595937	1.00[EUR][1000 genomes]
rs6601434	1.00[EUR][1000 genomes]
rs6601437	1.00[EUR][1000 genomes]
rs66533014	1.00[ASN][1000 genomes]
rs6988687	1.00[EUR][1000 genomes]
rs6997398	1.00[EUR][1000 genomes]
rs7000550	1.00[ASN][1000 genomes]
rs7009948	1.00[EUR][1000 genomes]
rs73534551	1.00[EUR][1000 genomes]
rs73534552	1.00[EUR][1000 genomes]
rs73534561	1.00[EUR][1000 genomes]
rs7812334	1.00[ASN][1000 genomes]
rs7830402	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021921	chr8:9958259-10212555	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv831231	chr8:10001214-10189094	Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1030934	chr8:10065169-10561161	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
4	nsv1016347	chr8:10091475-10223667	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv1028650	chr8:10101815-10178537	Enhancers ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:10130400-10144200	Weak transcription	Liver	Liver
2	chr8:10134200-10147600	Weak transcription	Primary neutrophils fromperipheralblood	blood

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