Variant report

Variant	rs10121562
Chromosome Location	chr9:140916808-140916809
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr9:140916780-140916930	MCF-7	breast:	n/a	n/a
2	CTCF	chr9:140916762-140917022	A549	lung:	n/a	chr9:140916937-140916950 chr9:140916932-140916950 chr9:140916934-140916947
3	CTCF	chr9:140916802-140917016	A549	lung:	n/a	chr9:140916937-140916950 chr9:140916932-140916950 chr9:140916934-140916947
4	TBP	chr9:140916792-140917077	H1-hESC	embryonic stem cell:	n/a	n/a
5	ZNF263	chr9:140916736-140917033	HEK293-T-REx	kidney:	n/a	n/a
6	CTCF	chr9:140916800-140916950	WERI-Rb-1	eye:	n/a	chr9:140916937-140916950 chr9:140916932-140916950 chr9:140916934-140916947
7	SMC3	chr9:140916795-140917068	Hela-S3	cervix:	n/a	chr9:140916926-140916933 chr9:140916934-140916944 chr9:140916934-140916948
8	MYC	chr9:140916707-140917176	A549	lung:	n/a	n/a
9	YY1	chr9:140916699-140917038	HepG2	liver:	n/a	n/a
10	MAX	chr9:140916741-140917232	A549	lung:	n/a	n/a
11	RAD21	chr9:140916703-140917113	ECC-1	luminal epithelium:	n/a	chr9:140916710-140916723 chr9:140917020-140917033 chr9:140916934-140916944 chr9:140916886-140916896 chr9:140916772-140916782
12	MAX	chr9:140916714-140917187	H1-hESC	embryonic stem cell:	n/a	n/a
13	ZNF143	chr9:140916798-140917088	H1-hESC	embryonic stem cell:	n/a	n/a
14	CTCF	chr9:140916761-140917127	GM12878	blood:	n/a	chr9:140916937-140916950 chr9:140917019-140917032 chr9:140916932-140916950 chr9:140916934-140916947
15	CTCF	chr9:140916574-140917291	A549	lung:	n/a	chr9:140916937-140916950 chr9:140917019-140917032 chr9:140916932-140916950 chr9:140916662-140916675 chr9:140916934-140916947 chr9:140916659-140916677
16	RAD21	chr9:140916769-140917171	A549	lung:	n/a	chr9:140917020-140917033 chr9:140916934-140916944 chr9:140916886-140916896 chr9:140916772-140916782
17	MAX	chr9:140916725-140917196	H1-hESC	embryonic stem cell:	n/a	n/a
18	GABPA	chr9:140916752-140917114	H1-hESC	embryonic stem cell:	n/a	n/a
19	RAD21	chr9:140916799-140917074	HepG2	liver:	n/a	chr9:140917020-140917033 chr9:140916934-140916944 chr9:140916886-140916896
20	CTCF	chr9:140916720-140917010	GM12869	blood:	n/a	chr9:140916937-140916950 chr9:140916932-140916950 chr9:140916934-140916947
21	CTCF	chr9:140916751-140917156	MCF-7	breast:	n/a	chr9:140916937-140916950 chr9:140917019-140917032 chr9:140916932-140916950 chr9:140916934-140916947
22	RAD21	chr9:140916689-140917162	A549	lung:	n/a	chr9:140916710-140916723 chr9:140917020-140917033 chr9:140916934-140916944 chr9:140916886-140916896 chr9:140916772-140916782
23	RAD21	chr9:140916704-140917200	H1-hESC	embryonic stem cell:	n/a	chr9:140916710-140916723 chr9:140917020-140917033 chr9:140916934-140916944 chr9:140916886-140916896 chr9:140916772-140916782
24	RAD21	chr9:140916751-140917036	H1-hESC	embryonic stem cell:	n/a	chr9:140917020-140917033 chr9:140916934-140916944 chr9:140916886-140916896 chr9:140916772-140916782
25	TCF12	chr9:140916808-140917109	H1-hESC	embryonic stem cell:	n/a	n/a
26	CTCF	chr9:140916754-140917063	K562	blood:	n/a	chr9:140916937-140916950 chr9:140917019-140917032 chr9:140916932-140916950 chr9:140916934-140916947
27	CTCF	chr9:140916714-140917101	H1-hESC	embryonic stem cell:	n/a	chr9:140916937-140916950 chr9:140917019-140917032 chr9:140916932-140916950 chr9:140916934-140916947
28	CTCF	chr9:140916803-140917065	GM12891	blood:	n/a	chr9:140916937-140916950 chr9:140917019-140917032 chr9:140916932-140916950 chr9:140916934-140916947
29	CTCF	chr9:140916753-140917169	K562	blood:	n/a	chr9:140916937-140916950 chr9:140917019-140917032 chr9:140916932-140916950 chr9:140916934-140916947
30	CTCF	chr9:140916725-140917102	H1-hESC	embryonic stem cell:	n/a	chr9:140916937-140916950 chr9:140917019-140917032 chr9:140916932-140916950 chr9:140916934-140916947
31	POLR2A	chr9:140916784-140917181	HCT-116	colon:	n/a	n/a
32	RAD21	chr9:140916729-140917119	H1-hESC	embryonic stem cell:	n/a	chr9:140917020-140917033 chr9:140916934-140916944 chr9:140916886-140916896 chr9:140916772-140916782
33	CTCF	chr9:140916769-140917110	K562	blood:	n/a	chr9:140916937-140916950 chr9:140917019-140917032 chr9:140916932-140916950 chr9:140916934-140916947
34	CTCF	chr9:140916805-140916997	HepG2	liver:	n/a	chr9:140916937-140916950 chr9:140916932-140916950 chr9:140916934-140916947

Variant related genes	Relation type
CACNA1B	TF binding region

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10121368	1.00[AMR][1000 genomes]
rs12344146	1.00[AMR][1000 genomes]
rs58810321	1.00[AMR][1000 genomes]
rs9314643	1.00[AMR][1000 genomes]
rs9314644	1.00[AMR][1000 genomes]
rs9410070	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:55 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531654	chr9:140110329-141033187	Flanking Active TSS Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	281 gene(s)	inside rSNPs	diseases
2	nsv932633	chr9:140240417-141053535	Enhancers Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
3	nsv1053628	chr9:140260666-141005637	Active TSS Weak transcription Strong transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
4	nsv534215	chr9:140286134-141008915	Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	n/a
5	nsv531665	chr9:140378700-141073897	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	n/a
6	nsv868924	chr9:140407572-141053525	Weak transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	n/a
7	nsv1039933	chr9:140408112-141005637	Weak transcription Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	68 gene(s)	inside rSNPs	n/a
8	nsv531666	chr9:140409395-141015925	Weak transcription Active TSS Strong transcription Genic enhancers Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	68 gene(s)	inside rSNPs	n/a
9	nsv1052036	chr9:140452641-141018985	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	n/a
10	nsv540365	chr9:140452641-141018985	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	n/a
11	nsv949702	chr9:140466816-141027939	Strong transcription Active TSS Genic enhancers Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	62 gene(s)	inside rSNPs	n/a
12	nsv531667	chr9:140468821-140936261	Weak transcription Strong transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	n/a
13	nsv531668	chr9:140492807-140986221	Strong transcription Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	n/a
14	nsv1053192	chr9:140532404-141005637	Enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	18 gene(s)	inside rSNPs	n/a
15	nsv540366	chr9:140532404-141005637	Weak transcription Strong transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	18 gene(s)	inside rSNPs	n/a
16	nsv1038090	chr9:140575692-141005637	Genic enhancers ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	15 gene(s)	inside rSNPs	n/a
17	nsv1055039	chr9:140612799-141005637	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	13 gene(s)	inside rSNPs	n/a
18	nsv540368	chr9:140612799-141005637	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	13 gene(s)	inside rSNPs	n/a
19	nsv1039470	chr9:140630889-141005637	ZNF genes & repeats Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	13 gene(s)	inside rSNPs	n/a
20	nsv894678	chr9:140632837-140924465	ZNF genes & repeats Weak transcription Active TSS Strong transcription Bivalent Enhancer Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	13 gene(s)	inside rSNPs	n/a
21	nsv1044418	chr9:140686097-141005637	Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Weak transcription Genic enhancers ZNF genes & repeats Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	11 gene(s)	inside rSNPs	n/a
22	nsv428228	chr9:140719304-141153431	Weak transcription ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	16 gene(s)	inside rSNPs	n/a
23	nsv869452	chr9:140724997-141018984	Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	10 gene(s)	inside rSNPs	n/a
24	nsv1044352	chr9:140757062-141018985	Weak transcription Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	n/a
25	nsv540371	chr9:140757062-141018985	Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	n/a
26	nsv491650	chr9:140757063-140954147	Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS ZNF genes & repeats Strong transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	n/a
27	nsv1046177	chr9:140796372-141019124	Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
28	nsv540372	chr9:140796372-141019124	Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Enhancers Genic enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
29	nsv917477	chr9:140796572-141073897	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	n/a
30	nsv894680	chr9:140801512-140978576	Bivalent Enhancer Strong transcription Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
31	nsv1046169	chr9:140801859-141018985	ZNF genes & repeats Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
32	nsv540373	chr9:140801859-141018985	Enhancers Strong transcription Weak transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
33	nsv1037624	chr9:140803971-141005637	ZNF genes & repeats Strong transcription Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
34	nsv540374	chr9:140803971-141005637	Weak transcription Bivalent Enhancer Enhancers ZNF genes & repeats Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
35	nsv894681	chr9:140816423-140938183	Strong transcription Genic enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
36	nsv1040618	chr9:140817187-141005637	Weak transcription Bivalent Enhancer Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
37	nsv1046495	chr9:140862503-141018985	Weak transcription Strong transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
38	nsv540375	chr9:140862503-141018985	ZNF genes & repeats Bivalent/Poised TSS Weak transcription Bivalent Enhancer Strong transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
39	nsv466691	chr9:140866189-141027939	Enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a
40	nsv469920	chr9:140866189-141027939	Strong transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a
41	nsv616025	chr9:140866189-141027939	Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a
42	nsv1041587	chr9:140878007-141091382	Weak transcription Strong transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	n/a
43	nsv894682	chr9:140879370-141065054	Bivalent Enhancer Active TSS ZNF genes & repeats Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a
44	nsv831764	chr9:140884246-141065853	Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a
45	esv2758206	chr9:140885563-141153431	Strong transcription Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	n/a
46	esv2759722	chr9:140885563-141153431	Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	n/a
47	nsv427854	chr9:140885563-141153431	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	n/a
48	nsv1043683	chr9:140890714-140955547	Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
49	nsv1040425	chr9:140900703-141005637	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
50	nsv540376	chr9:140900703-141005637	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140902400-140917000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr9:140902800-140917600	Weak transcription	Right Atrium	heart
3	chr9:140903800-140917000	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr9:140904600-140917000	Weak transcription	Spleen	Spleen
5	chr9:140904800-140917000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr9:140905200-140917000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr9:140916200-140917000	Enhancers	Brain Inferior Temporal Lobe	brain
8	chr9:140916200-140917600	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
9	chr9:140916200-140917600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
10	chr9:140916200-140918600	Enhancers	Pancreas	Pancrea
11	chr9:140916600-140917000	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
12	chr9:140916600-140917000	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
13	chr9:140916600-140917000	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
14	chr9:140916600-140917000	Bivalent Enhancer	Brain Anterior Caudate	brain
15	chr9:140916600-140917200	Bivalent Enhancer	Brain Hippocampus Middle	brain
16	chr9:140916600-140917400	Bivalent Enhancer	Primary B cells from peripheral blood	blood
17	chr9:140916600-140917400	Enhancers	Primary T helper cells fromperipheralblood	blood
18	chr9:140916600-140917400	Bivalent Enhancer	Brain Dorsolateral Prefrontal Cortex	brain
19	chr9:140916600-140917600	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
20	chr9:140916800-140917000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
21	chr9:140916800-140917000	Bivalent Enhancer	Primary T helper 17 cells PMA-I stimulated	--
22	chr9:140916800-140917000	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr9:140916800-140917000	Bivalent Enhancer	Brain Germinal Matrix	brain
24	chr9:140916800-140917200	Bivalent Enhancer	Primary hematopoietic stem cells	blood
25	chr9:140916800-140917200	Bivalent Enhancer	Primary T helper naive cells fromperipheralblood	blood
26	chr9:140916800-140917200	Bivalent Enhancer	Fetal Brain Female	brain
27	chr9:140916800-140917400	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
28	chr9:140916800-140917600	Bivalent Enhancer	Fetal Muscle Leg	muscle
29	chr9:140916800-140917800	Flanking Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr9:140916800-140917800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin

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