Variant report

Variant	rs10131507
Chromosome Location	chr14:37466492-37466493
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:37458230..37460873-chr14:37465675..37468157,2	K562	blood:
2	chr14:37464918..37466831-chr14:37480204..37482482,2	MCF-7	breast:
3	chr14:37456803..37459730-chr14:37465675..37468170,2	K562	blood:

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10129948	0.96[ASN][1000 genomes]
rs10130430	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10132205	1.00[ASN][1000 genomes]
rs10137636	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10141660	0.96[ASN][1000 genomes]
rs10148776	0.90[EUR][1000 genomes]
rs11850139	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12050275	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17105840	0.96[ASN][1000 genomes]
rs17105858	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17105860	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17105883	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17105951	0.86[ASN][1000 genomes]
rs2022584	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2022585	0.82[ASN][1000 genomes]
rs2022727	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2022730	0.96[ASN][1000 genomes]
rs2056355	0.96[ASN][1000 genomes]
rs2139746	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2145131	0.96[ASN][1000 genomes]
rs2180599	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28414995	0.94[ASN][1000 genomes]
rs28540719	0.86[ASN][1000 genomes]
rs61989484	0.94[ASN][1000 genomes]
rs6571771	0.85[EUR][1000 genomes]
rs6571772	0.85[EUR][1000 genomes]
rs7142715	0.95[ASN][1000 genomes]
rs7143069	0.96[ASN][1000 genomes]
rs7147216	0.96[ASN][1000 genomes]
rs7156230	0.86[ASN][1000 genomes]
rs751202	0.86[ASN][1000 genomes]
rs8013390	0.87[EUR][1000 genomes]
rs8019355	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8021342	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs909015	0.86[ASN][1000 genomes]
rs911008	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs925999	0.93[ASN][1000 genomes]
rs9805891	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534288	chr14:37254539-37697745	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:37465000-37466600	Enhancers	HMEC	breast
2	chr14:37465200-37467000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:37465400-37467800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr14:37465400-37468000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr14:37465600-37466600	Enhancers	NH-A	brain
6	chr14:37465600-37466600	Enhancers	NHDF-Ad	bronchial
7	chr14:37465600-37467400	Enhancers	Osteobl	bone
8	chr14:37465600-37467800	Enhancers	A549	lung
9	chr14:37465600-37468400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr14:37465600-37469800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr14:37465800-37466600	Enhancers	HUVEC	blood vessel
12	chr14:37465800-37466600	Enhancers	K562	blood
13	chr14:37465800-37467200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr14:37466000-37466600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
15	chr14:37466000-37466600	Enhancers	HSMM	muscle
16	chr14:37466400-37467200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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