Variant report

Variant	rs10133839
Chromosome Location	chr14:55710907-55710908
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:55709704..55712679-chr14:55737747..55740445,2	K562	blood:
2	chr14:55709259..55712260-chr14:55714004..55717778,3	K562	blood:
3	chr14:55710760..55712909-chr14:55714004..55716438,2	K562	blood:

Variant related genes	Relation type
ENSG00000178974	Chromatin interaction
ENSG00000258413	Chromatin interaction

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10129944	1.00[YRI][hapmap];1.00[EUR][1000 genomes]
rs10132251	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10133318	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10134482	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10134533	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10135042	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10137382	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10138287	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10140700	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10141962	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10142150	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10142435	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10143190	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10146432	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10148371	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10149038	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10151981	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10438128	1.00[EUR][1000 genomes]
rs13379284	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17128204	1.00[EUR][1000 genomes]
rs17128286	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17128299	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17128411	0.82[YRI][hapmap];1.00[EUR][1000 genomes]
rs28415601	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28458773	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28459500	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28488729	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28584735	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34630492	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60302297	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60342915	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61106193	1.00[EUR][1000 genomes]
rs9323281	1.00[YRI][hapmap];1.00[EUR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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