Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	WRNIP1	chr14:72426704-72426904	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:72400385..72403304-chr14:72425307..72428044,2	MCF-7	breast:
2	chr14:72425794..72427539-chr14:72430812..72433255,2	MCF-7	breast:

Variant related genes	Relation type
RGS6	TF binding region
ENSG00000182732	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10047915	1.00[CEU][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs10129266	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10130235	1.00[AMR][1000 genomes]
rs10132631	1.00[CEU][hapmap]
rs10134070	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10146194	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11851166	1.00[CEU][hapmap]
rs28410983	1.00[EUR][1000 genomes]
rs28417884	1.00[EUR][1000 genomes]
rs28702941	1.00[EUR][1000 genomes]
rs28776512	1.00[EUR][1000 genomes]
rs2877775	1.00[CEU][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28829720	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57027270	1.00[EUR][1000 genomes]
rs6574036	0.82[YRI][hapmap]
rs7150767	1.00[EUR][1000 genomes]
rs7151873	1.00[EUR][1000 genomes]
rs7151878	1.00[EUR][1000 genomes]
rs72625695	1.00[EUR][1000 genomes]
rs728495	0.82[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72425400-72427000	Enhancers	Adipose Nuclei	Adipose
2	chr14:72425400-72427800	Weak transcription	GM12878-XiMat	blood
3	chr14:72425600-72430800	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr14:72425600-72431200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr14:72425800-72426800	Enhancers	Right Ventricle	heart
6	chr14:72425800-72427600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr14:72426000-72426800	Enhancers	Left Ventricle	heart
8	chr14:72426200-72428400	Weak transcription	Fetal Heart	heart
9	chr14:72426600-72427400	Weak transcription	Lung	lung

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