Variant report

Variant	rs10158926
Chromosome Location	chr1:225085636-225085637
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:225082757..225084326-chr1:225084761..225087654,2	K562	blood:

Variant related genes	Relation type
ENSG00000185842	Chromatin interaction

Extended variants
information (count: 81 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:81)

rs_ID	r²[population]
rs10495228	0.84[ASN][1000 genomes]
rs10495229	0.80[ASN][1000 genomes]
rs1080260	0.85[ASN][1000 genomes]
rs1110378	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12563434	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12564683	0.85[ASN][1000 genomes]
rs12565019	0.84[ASN][1000 genomes]
rs12565439	0.80[ASN][1000 genomes]
rs12566396	0.80[ASN][1000 genomes]
rs12566886	0.80[ASN][1000 genomes]
rs12567461	0.84[ASN][1000 genomes]
rs12567470	0.84[ASN][1000 genomes]
rs1506072	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs1600865	0.96[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs16857787	0.84[ASN][1000 genomes]
rs16858145	0.84[ASN][1000 genomes]
rs16858216	0.84[ASN][1000 genomes]
rs16858299	0.85[ASN][1000 genomes]
rs16858661	0.80[ASN][1000 genomes]
rs16858758	0.80[ASN][1000 genomes]
rs16858766	0.80[ASN][1000 genomes]
rs16858829	0.80[ASN][1000 genomes]
rs16858831	0.80[ASN][1000 genomes]
rs16858932	0.80[ASN][1000 genomes]
rs16858962	0.80[ASN][1000 genomes]
rs1936629	0.88[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs1936631	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1936635	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2014656	0.84[AMR][1000 genomes]
rs2101143	0.84[ASN][1000 genomes]
rs2254158	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2254406	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2291227	0.80[ASN][1000 genomes]
rs2406097	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2406098	0.84[ASN][1000 genomes]
rs2449266	0.81[AFR][1000 genomes]
rs2449269	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2449315	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2449316	0.80[ASN][1000 genomes]
rs2449320	0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2489296	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2489300	0.80[ASN][1000 genomes]
rs2489303	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2489310	0.96[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2489311	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2489313	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2489314	0.84[AMR][1000 genomes]
rs2489324	0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2489353	0.83[AMR][1000 genomes]
rs2501061	0.80[ASN][1000 genomes]
rs2501064	0.80[ASN][1000 genomes]
rs2501066	0.80[ASN][1000 genomes]
rs2501072	0.80[ASN][1000 genomes]
rs2501078	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2501081	0.84[ASN][1000 genomes]
rs2501082	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2501083	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2501085	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2501087	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2501089	0.81[AFR][1000 genomes]
rs2501099	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2501120	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2501140	0.80[ASN][1000 genomes]
rs2501141	0.80[ASN][1000 genomes]
rs2501147	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2501151	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2501153	0.80[ASN][1000 genomes]
rs2501156	0.80[ASN][1000 genomes]
rs4379650	0.80[ASN][1000 genomes]
rs55668169	0.80[ASN][1000 genomes]
rs55754430	0.84[ASN][1000 genomes]
rs56088704	0.80[ASN][1000 genomes]
rs56152573	0.80[ASN][1000 genomes]
rs56203783	0.82[ASN][1000 genomes]
rs57137890	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59420435	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61466304	0.84[ASN][1000 genomes]
rs6426163	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72629701	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72629702	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs729398	0.84[ASN][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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