Variant report

Variant	rs10160769
Chromosome Location	chr11:76474827-76474828
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76463120..76464705-chr11:76473481..76475245,2	K562	blood:

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10160660	1.00[EUR][1000 genomes]
rs10437754	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10793194	0.94[CEU][hapmap];1.00[EUR][1000 genomes]
rs10793195	0.98[EUR][1000 genomes]
rs10899278	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10899279	1.00[EUR][1000 genomes]
rs10899280	0.99[EUR][1000 genomes]
rs10899281	0.98[EUR][1000 genomes]
rs10899282	0.98[EUR][1000 genomes]
rs10899283	0.98[EUR][1000 genomes]
rs11236924	0.99[EUR][1000 genomes]
rs11236936	0.98[EUR][1000 genomes]
rs1149603	0.91[YRI][hapmap];0.82[AFR][1000 genomes]
rs12273016	0.86[EUR][1000 genomes]
rs12282785	1.00[EUR][1000 genomes]
rs12286786	0.91[ASN][1000 genomes]
rs12290350	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs12788118	0.87[EUR][1000 genomes]
rs1440977	1.00[CEU][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1440978	0.94[CEU][hapmap];1.00[EUR][1000 genomes]
rs1440979	0.99[EUR][1000 genomes]
rs1440980	0.92[EUR][1000 genomes]
rs1465900	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs1837679	0.93[EUR][1000 genomes]
rs1837680	0.95[CEU][hapmap];0.98[EUR][1000 genomes]
rs1866843	0.99[EUR][1000 genomes]
rs3758711	0.94[CEU][hapmap];0.98[EUR][1000 genomes]
rs4309181	0.98[EUR][1000 genomes]
rs56228827	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7107409	0.99[EUR][1000 genomes]
rs737185	1.00[CEU][hapmap];0.99[EUR][1000 genomes]
rs7933092	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7942337	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7942368	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs876361	0.82[AFR][1000 genomes]

No data

Chromatin state (count:74 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76467800-76478400	Weak transcription	Rectal Mucosa Donor 29	rectum
2	chr11:76470000-76475000	Weak transcription	Fetal Brain Female	brain
3	chr11:76470200-76479000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr11:76470400-76475000	Weak transcription	Fetal Brain Male	brain
5	chr11:76470600-76482000	Weak transcription	Psoas Muscle	Psoas
6	chr11:76471000-76475000	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr11:76471600-76475000	Weak transcription	Fetal Heart	heart
8	chr11:76472200-76477200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr11:76473000-76478600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr11:76473200-76475000	Enhancers	A549	lung
11	chr11:76473400-76475000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr11:76473600-76483200	Enhancers	Esophagus	oesophagus
13	chr11:76473800-76475200	Enhancers	Duodenum Smooth Muscle	Duodenum
14	chr11:76473800-76475400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr11:76473800-76475400	Enhancers	Small Intestine	intestine
16	chr11:76473800-76475600	Enhancers	Adipose Nuclei	Adipose
17	chr11:76473800-76479200	Enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr11:76474000-76475400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr11:76474000-76475400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
20	chr11:76474000-76475400	Enhancers	Skeletal Muscle Male	skeletal muscle
21	chr11:76474000-76475600	Enhancers	Stomach Mucosa	stomach
22	chr11:76474000-76475800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr11:76474000-76475800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
24	chr11:76474000-76475800	Enhancers	Right Atrium	heart
25	chr11:76474000-76476000	Enhancers	HMEC	breast
26	chr11:76474000-76476000	Enhancers	HUVEC	blood vessel
27	chr11:76474000-76476200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr11:76474000-76476200	Enhancers	Lung	lung
29	chr11:76474000-76478800	Enhancers	Duodenum Mucosa	Duodenum
30	chr11:76474000-76481000	Enhancers	Fetal Muscle Trunk	muscle
31	chr11:76474000-76481200	Enhancers	Spleen	Spleen
32	chr11:76474000-76485600	Enhancers	Left Ventricle	heart
33	chr11:76474200-76475200	Enhancers	Stomach Smooth Muscle	stomach
34	chr11:76474200-76475400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr11:76474200-76475400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr11:76474200-76475400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
37	chr11:76474200-76475400	Enhancers	Brain Angular Gyrus	brain
38	chr11:76474200-76475400	Enhancers	NHDF-Ad	bronchial
39	chr11:76474200-76475400	Enhancers	NHLF	lung
40	chr11:76474200-76475800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr11:76474200-76475800	Enhancers	Brain Germinal Matrix	brain
42	chr11:76474200-76476200	Enhancers	NH-A	brain
43	chr11:76474200-76476400	Enhancers	Cortex derived primary cultured neurospheres	brain
44	chr11:76474200-76477400	Enhancers	Fetal Lung	lung
45	chr11:76474200-76478200	Enhancers	Right Ventricle	heart
46	chr11:76474400-76475200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
47	chr11:76474400-76475400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr11:76474400-76475400	Enhancers	Muscle Satellite Cultured Cells	--
49	chr11:76474400-76475400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
50	chr11:76474400-76475400	Enhancers	Colon Smooth Muscle	Colon

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