Variant report

Variant rs1016372
Chromosome Location chr2:33260432-33260433
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33246400-33262800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr2:33250200-33263200 Weak transcription Left Ventricle heart
3 chr2:33250200-33265600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr2:33250600-33273000 Weak transcription K562 blood
5 chr2:33258400-33262200 Enhancers Fetal Heart heart
6 chr2:33258800-33260600 Active TSS Stomach Smooth Muscle stomach
7 chr2:33259200-33261800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr2:33259200-33263400 Weak transcription Brain Germinal Matrix brain
9 chr2:33259200-33265600 Weak transcription A549 lung
10 chr2:33259200-33267400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr2:33259200-33276200 Weak transcription Right Ventricle heart
12 chr2:33259400-33260600 Enhancers Cortex derived primary cultured neurospheres brain
13 chr2:33259400-33261400 Enhancers Rectal Smooth Muscle rectum
14 chr2:33259400-33262600 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr2:33259800-33263600 Weak transcription Fetal Stomach stomach
16 chr2:33260000-33260600 Enhancers Brain Inferior Temporal Lobe brain
17 chr2:33260200-33260800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr2:33260200-33262800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr2:33260200-33262800 Weak transcription HMEC breast
20 chr2:33260200-33263000 Weak transcription NHEK skin
21 chr2:33260200-33263800 Weak transcription Liver Liver
22 chr2:33260200-33267000 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr2:33260200-33267400 Weak transcription Aorta Aorta
24 chr2:33260200-33268000 Weak transcription Fetal Muscle Leg muscle
25 chr2:33260200-33268400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr2:33260200-33273400 Weak transcription HUVEC blood vessel
27 chr2:33260200-33276400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr2:33260200-33295400 Weak transcription Right Atrium heart
29 chr2:33260400-33260600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr2:33260400-33260600 Enhancers Brain Hippocampus Middle brain
31 chr2:33260400-33261000 Enhancers Colon Smooth Muscle Colon
32 chr2:33260400-33261200 Weak transcription Ovary ovary
33 chr2:33260400-33262800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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