Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:37748014..37749874-chr2:37757456..37760173,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10084269	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10165975	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10177859	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10180573	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10184286	0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11124588	0.85[ASN][1000 genomes]
rs12472489	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13407307	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4274577	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4352210	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4387769	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4430920	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4461243	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4538180	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4670726	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4670727	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62135619	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62135620	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6544089	0.82[ASN][1000 genomes]
rs6544090	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6759677	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7559976	0.81[ASN][1000 genomes]
rs7589042	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7593076	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9309009	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9309010	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833814	chr2:37643132-37840247	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv456374	chr2:37669487-37868214	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv470453	chr2:37669487-37868214	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv581473	chr2:37669487-37868214	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37743200-37749000	Weak transcription	Fetal Heart	heart
2	chr2:37744600-37751200	Weak transcription	Psoas Muscle	Psoas
3	chr2:37748600-37749800	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr2:37748600-37750800	Enhancers	Monocytes-CD14+_RO01746	blood

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