Variant report

Variant	rs10182553
Chromosome Location	chr2:210626867-210626868
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs10490022	0.88[ASN][1000 genomes]
rs10932306	0.91[ASN][1000 genomes]
rs11674672	0.86[ASN][1000 genomes]
rs11674950	0.88[ASN][1000 genomes]
rs11677476	0.86[ASN][1000 genomes]
rs11677489	0.91[ASN][1000 genomes]
rs11678044	0.86[ASN][1000 genomes]
rs11679862	0.86[ASN][1000 genomes]
rs11680007	0.88[ASN][1000 genomes]
rs11680964	0.86[ASN][1000 genomes]
rs11689771	0.88[ASN][1000 genomes]
rs11692608	0.88[ASN][1000 genomes]
rs11693202	0.88[ASN][1000 genomes]
rs11884376	0.91[ASN][1000 genomes]
rs11887161	0.88[ASN][1000 genomes]
rs11900602	0.86[ASN][1000 genomes]
rs12105654	0.89[ASN][1000 genomes]
rs12105660	0.91[ASN][1000 genomes]
rs12615516	0.89[ASN][1000 genomes]
rs12619203	0.91[ASN][1000 genomes]
rs12622305	0.86[ASN][1000 genomes]
rs1476876	0.88[ASN][1000 genomes]
rs1476877	0.88[ASN][1000 genomes]
rs2098204	0.85[ASN][1000 genomes]
rs35337581	0.86[ASN][1000 genomes]
rs35872449	0.91[ASN][1000 genomes]
rs57305145	0.81[ASN][1000 genomes]
rs57637604	0.88[ASN][1000 genomes]
rs58248939	0.91[ASN][1000 genomes]
rs60161291	0.88[ASN][1000 genomes]
rs60640585	0.88[ASN][1000 genomes]
rs61356588	0.88[ASN][1000 genomes]
rs6716831	0.87[ASN][1000 genomes]
rs6742314	0.89[ASN][1000 genomes]
rs73074750	0.91[ASN][1000 genomes]
rs73074751	0.91[ASN][1000 genomes]
rs73074763	0.91[ASN][1000 genomes]
rs73074778	0.88[ASN][1000 genomes]
rs73074779	0.88[ASN][1000 genomes]
rs73074784	0.88[ASN][1000 genomes]
rs73074787	0.88[ASN][1000 genomes]
rs73074791	0.88[ASN][1000 genomes]
rs73074801	0.86[ASN][1000 genomes]
rs73076704	0.86[ASN][1000 genomes]
rs73076710	0.86[ASN][1000 genomes]
rs7564369	0.88[ASN][1000 genomes]
rs7595017	0.91[ASN][1000 genomes]
rs975551	0.88[ASN][1000 genomes]
rs975552	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009129	chr2:210550858-210681136	Bivalent/Poised TSS Active TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:210625800-210628000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr2:210626000-210628400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr2:210626200-210627200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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