Variant report

Variant rs10200120
Chromosome Location chr2:55472586-55472587
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55461400-55477600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:55461600-55477000 Strong transcription Fetal Muscle Leg muscle
3 chr2:55461600-55481600 Strong transcription Fetal Thymus thymus
4 chr2:55461600-55495400 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr2:55461600-55495400 Weak transcription Stomach Mucosa stomach
6 chr2:55461800-55474400 Strong transcription Primary T cells fromperipheralblood blood
7 chr2:55461800-55493400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
8 chr2:55461800-55495000 Weak transcription Fetal Brain Male brain
9 chr2:55462000-55472600 Weak transcription Fetal Heart heart
10 chr2:55462000-55493200 Strong transcription Duodenum Mucosa Duodenum
11 chr2:55462200-55473200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr2:55462200-55490200 Weak transcription Small Intestine intestine
13 chr2:55462400-55476800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr2:55462400-55476800 Strong transcription Rectal Mucosa Donor 29 rectum
15 chr2:55462600-55485800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr2:55463000-55477600 Strong transcription Fetal Adrenal Gland Adrenal Gland
17 chr2:55463000-55480200 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr2:55463000-55481000 Weak transcription Placenta Amnion Placenta Amnion
19 chr2:55463000-55495400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr2:55463200-55481000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr2:55463400-55474200 Weak transcription Aorta Aorta
22 chr2:55463400-55475800 Weak transcription Spleen Spleen
23 chr2:55463400-55488200 Weak transcription Pancreas Pancrea
24 chr2:55463600-55474800 Weak transcription Thymus Thymus
25 chr2:55463600-55483800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr2:55463800-55475400 Weak transcription Esophagus oesophagus
27 chr2:55463800-55479600 Weak transcription H9 Cell Line embryonic stem cell
28 chr2:55463800-55486200 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr2:55463800-55490400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr2:55463800-55494800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr2:55463800-55495600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr2:55464000-55476200 Weak transcription Fetal Kidney kidney
33 chr2:55464200-55473600 Weak transcription Brain Cingulate Gyrus brain
34 chr2:55464400-55476200 Weak transcription Brain Angular Gyrus brain
35 chr2:55464400-55479600 Weak transcription NHLF lung
36 chr2:55464600-55475600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr2:55464600-55476200 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr2:55464600-55476200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr2:55464600-55479400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr2:55464600-55495800 Weak transcription ES-WA7 Cell Line embryonic stem cell
41 chr2:55464800-55472600 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr2:55465400-55490600 Weak transcription Brain Germinal Matrix brain
43 chr2:55465600-55473200 Weak transcription HUVEC blood vessel
44 chr2:55465600-55486000 Strong transcription iPS-20b Cell Line embryonic stem cell
45 chr2:55465600-55494400 Strong transcription HUES64 Cell Line embryonic stem cell
46 chr2:55465800-55476400 Strong transcription Primary B cells from peripheral blood blood
47 chr2:55465800-55477600 Strong transcription HUES48 Cell Line embryonic stem cell
48 chr2:55466000-55493200 Strong transcription Rectal Mucosa Donor 31 rectum
49 chr2:55466200-55476600 Strong transcription Fetal Lung lung
50 chr2:55466600-55475000 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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