The 2.0 version of rSNPBase

Variant report

Variant rs10219196
Chromosome Location chr11:17365132-17365133
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17308200-17372600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr11:17320800-17372400 Weak transcription GM12878-XiMat blood
3 chr11:17334000-17371000 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr11:17336200-17372600 Weak transcription HUVEC blood vessel
5 chr11:17350400-17365200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr11:17352400-17365800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr11:17352600-17365400 Weak transcription HMEC breast
8 chr11:17354000-17365200 Weak transcription Muscle Satellite Cultured Cells --
9 chr11:17354200-17369200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr11:17354400-17373000 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr11:17354600-17365600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr11:17354600-17372400 Weak transcription Liver Liver
13 chr11:17355200-17365400 Weak transcription NH-A brain
14 chr11:17356000-17365400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr11:17356000-17367600 Weak transcription Primary hematopoietic stem cells blood
16 chr11:17356000-17371000 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr11:17356000-17372200 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr11:17356000-17372400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr11:17356000-17372600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr11:17356000-17372600 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr11:17356000-17372800 Weak transcription Primary T cells fromperipheralblood blood
22 chr11:17356000-17372800 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr11:17356200-17365400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr11:17356200-17372400 Weak transcription Primary monocytes fromperipheralblood blood
25 chr11:17356200-17372400 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr11:17356200-17372400 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr11:17356200-17372600 Weak transcription Adipose Nuclei Adipose
28 chr11:17356200-17372800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr11:17356200-17372800 Weak transcription Aorta Aorta
30 chr11:17356200-17372800 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr11:17356200-17372800 Weak transcription Ovary ovary
32 chr11:17356200-17373000 Weak transcription Left Ventricle heart
33 chr11:17356400-17373000 Weak transcription Esophagus oesophagus
34 chr11:17359000-17365400 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr11:17359000-17372400 Weak transcription Brain Germinal Matrix brain
36 chr11:17359200-17372200 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr11:17360000-17365400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr11:17360800-17370600 Weak transcription Thymus Thymus
39 chr11:17364800-17365200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr11:17364800-17365400 Enhancers NHLF lung
41 chr11:17364800-17365600 Enhancers Osteobl bone
42 chr11:17364800-17366000 Enhancers NHDF-Ad bronchial
43 chr11:17364800-17366200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr11:17364800-17368200 Strong transcription Fetal Thymus thymus
45 chr11:17364800-17368800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr11:17364800-17371600 Strong transcription Dnd41 blood
47 chr11:17365000-17366000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr11:17365000-17366200 Enhancers NHEK skin
49 chr11:17365000-17366600 Strong transcription Primary T cells from cord blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015