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Variant report
Variant
rs10231685
Chromosome Location
chr7:104176289-104176290
allele
C/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:2)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:2 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr7:104175106..104177355-chr7:104179666..104181694,2
MCF-7
breast:
2
chr7:104171945..104173654-chr7:104175493..104177465,2
K562
blood:
No data
No data
No data
No data
Extended variants information (count: 4 )
Associated traits (count: 1 )
rSNPs within LD-proxies of this variant (count:4)
rs_ID
r
2
[population]
rs10255304
0.94[CEU][hapmap];0.94[GIH][hapmap];0.88[MEX][hapmap];0.89[TSI][hapmap]
rs10265851
0.94[CEU][hapmap]
rs10274079
1.00[CEU][hapmap]
rs13233643
0.94[CEU][hapmap];0.94[GIH][hapmap];0.88[MEX][hapmap];0.89[TSI][hapmap]
mRNA abundance (count:1)
SNP
Gene
Cis/trans
Tissue
Source
rs10231685
EPO
cis
parietal
SCAN
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links