Variant report

Variant	rs10243072
Chromosome Location	chr7:104160202-104160203
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10255304	1.00[CHB][hapmap];1.00[CHD][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap]
rs10265851	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1113933	1.00[JPT][hapmap]
rs12705234	1.00[JPT][hapmap]
rs12705239	1.00[JPT][hapmap]
rs12705240	1.00[JPT][hapmap]
rs12705241	1.00[JPT][hapmap]
rs12705242	1.00[JPT][hapmap]
rs12705243	1.00[JPT][hapmap]
rs13222581	1.00[JPT][hapmap]
rs13231181	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13233643	1.00[CHB][hapmap];1.00[CHD][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap]
rs13236834	1.00[JPT][hapmap]
rs17421686	0.91[ASN][1000 genomes]
rs35057092	0.91[ASN][1000 genomes]
rs67291877	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv888925	chr7:104047599-104170560	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv888926	chr7:104146352-104164294	Inactive region	Chromatin interactive region	n/a	n/a	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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