Variant report

Variant	rs10249033
Chromosome Location	chr7:103769095-103769096
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 60 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs1019312	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10235201	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10241191	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10242752	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10250235	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10251308	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10255806	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10258773	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10260238	0.81[AFR][1000 genomes]
rs10262560	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs10262796	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10262996	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10266337	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10267412	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10267940	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10268209	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10270562	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10271923	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10276243	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10278320	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10279736	1.00[AMR][1000 genomes]
rs10281709	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10282300	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10487184	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10487192	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10953405	1.00[ASN][1000 genomes]
rs11489610	0.81[AMR][1000 genomes]
rs11972422	0.81[AMR][1000 genomes]
rs11979390	0.81[AMR][1000 genomes]
rs11979993	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11980018	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12154582	1.00[ASN][1000 genomes]
rs16873387	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17159290	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2385134	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28644319	0.90[AMR][1000 genomes]
rs28645598	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28686914	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28702500	1.00[AMR][1000 genomes]
rs28820003	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs58842751	0.90[AMR][1000 genomes]
rs59750244	0.81[AMR][1000 genomes]
rs62485866	1.00[ASN][1000 genomes]
rs62485867	1.00[ASN][1000 genomes]
rs62485873	1.00[ASN][1000 genomes]
rs6948021	0.90[AMR][1000 genomes]
rs6949887	0.81[AFR][1000 genomes]
rs6954109	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs6962621	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6975642	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73413894	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs73415704	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs73415717	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs73415786	0.81[AMR][1000 genomes]
rs73415801	0.81[AMR][1000 genomes]
rs73417718	0.81[AMR][1000 genomes]
rs7777446	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7777906	0.81[AMR][1000 genomes]
rs9655777	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9656090	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:120 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103761400-103771000	Weak transcription	Fetal Lung	lung
2	chr7:103761400-103778600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr7:103761600-103769600	Weak transcription	HSMM	muscle
4	chr7:103762800-103774200	Weak transcription	HepG2	liver
5	chr7:103763000-103777600	Weak transcription	Fetal Intestine Small	intestine
6	chr7:103763200-103769600	Weak transcription	Primary hematopoietic stem cells	blood
7	chr7:103763400-103773000	Weak transcription	Fetal Heart	heart
8	chr7:103763400-103774200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr7:103763400-103779400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr7:103763600-103770800	Weak transcription	Duodenum Mucosa	Duodenum
11	chr7:103763600-103776200	Weak transcription	Colonic Mucosa	Colon
12	chr7:103763800-103769800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
13	chr7:103763800-103815000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr7:103764000-103769400	Weak transcription	A549	lung
15	chr7:103764000-103769600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr7:103764000-103783200	Weak transcription	NHLF	lung
17	chr7:103764000-103829800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr7:103764200-103769400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
19	chr7:103764200-103769600	Weak transcription	Placenta	Placenta
20	chr7:103764400-103772400	Weak transcription	Fetal Intestine Large	intestine
21	chr7:103764400-103776200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
22	chr7:103764400-103776400	Weak transcription	Primary neutrophils fromperipheralblood	blood
23	chr7:103764400-103776400	Weak transcription	NH-A	brain
24	chr7:103764400-103777800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr7:103764400-103778400	Weak transcription	NHDF-Ad	bronchial
26	chr7:103764400-103820200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
27	chr7:103764600-103771200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr7:103764600-103771200	Weak transcription	HUVEC	blood vessel
29	chr7:103764600-103772800	Weak transcription	HUES6 Cell Line	embryonic stem cell
30	chr7:103765000-103774600	Strong transcription	Primary B cells from cord blood	blood
31	chr7:103765400-103778000	Weak transcription	Stomach Mucosa	stomach
32	chr7:103765600-103770800	Weak transcription	Osteobl	bone
33	chr7:103765600-103815000	Weak transcription	Brain Angular Gyrus	brain
34	chr7:103765600-103840200	Weak transcription	Small Intestine	intestine
35	chr7:103765800-103770800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
36	chr7:103765800-103770800	Weak transcription	Placenta Amnion	Placenta Amnion
37	chr7:103765800-103776400	Weak transcription	Fetal Brain Female	brain
38	chr7:103766000-103770600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
39	chr7:103766000-103770800	Weak transcription	Thymus	Thymus
40	chr7:103766000-103770800	Weak transcription	HSMMtube	muscle
41	chr7:103766000-103771000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
42	chr7:103766000-103774400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
43	chr7:103766000-103776200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
44	chr7:103766000-103778000	Weak transcription	H9 Cell Line	embryonic stem cell
45	chr7:103766200-103769800	Weak transcription	Duodenum Smooth Muscle	Duodenum
46	chr7:103766200-103770600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
47	chr7:103766200-103770600	Weak transcription	Brain Inferior Temporal Lobe	brain
48	chr7:103766200-103770800	Weak transcription	Aorta	Aorta
49	chr7:103766200-103770800	Weak transcription	Ovary	ovary
50	chr7:103766200-103771000	Weak transcription	Fetal Muscle Trunk	muscle

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