Variant report

Variant	rs10254402
Chromosome Location	chr7:104192398-104192399
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:104184713..104186928-chr7:104190898..104193691,2	K562	blood:
2	chr7:104186846..104189235-chr7:104190129..104192831,2	MCF-7	breast:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10266072	0.85[JPT][hapmap]
rs10270298	1.00[MEX][hapmap];0.93[YRI][hapmap];0.83[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs10480656	0.90[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs11761864	0.85[JPT][hapmap]
rs11972379	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12705232	0.85[JPT][hapmap]
rs13224644	1.00[CEU][hapmap]
rs13227694	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs13232800	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs13235175	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs13237905	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs1477110	0.89[GIH][hapmap];0.82[JPT][hapmap]
rs2193211	1.00[CEU][hapmap]
rs34244898	0.92[ASN][1000 genomes]
rs34250422	0.95[ASN][1000 genomes]
rs34560470	0.89[ASN][1000 genomes]
rs35068515	0.95[ASN][1000 genomes]
rs35881518	0.94[ASN][1000 genomes]
rs4140743	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs4335061	0.90[CHB][hapmap];0.85[JPT][hapmap]
rs4354244	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs4400323	0.90[CHB][hapmap];0.85[JPT][hapmap]
rs4406342	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs62485146	0.97[ASN][1000 genomes]
rs6969323	0.82[CHB][hapmap];0.85[JPT][hapmap];0.81[ASN][1000 genomes]
rs7780878	0.85[JPT][hapmap]
rs7781577	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:104190800-104192400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr7:104191200-104192600	Weak transcription	Adipose Nuclei	Adipose
3	chr7:104191600-104192800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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