The 2.0 version of rSNPBase

Variant report

Variant rs10259857
Chromosome Location chr7:101771663-101771664
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:101755200-101787000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr7:101755400-101773200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr7:101760200-101796000 Weak transcription Rectal Smooth Muscle rectum
4 chr7:101760400-101788600 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr7:101760400-101789400 Weak transcription Right Ventricle heart
6 chr7:101760400-101795800 Weak transcription Left Ventricle heart
7 chr7:101761000-101795600 Weak transcription Colon Smooth Muscle Colon
8 chr7:101763400-101772200 Weak transcription Fetal Brain Female brain
9 chr7:101763600-101773200 Weak transcription Fetal Kidney kidney
10 chr7:101763600-101790400 Weak transcription Brain Anterior Caudate brain
11 chr7:101765200-101788600 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr7:101765200-101801200 Weak transcription Pancreas Pancrea
13 chr7:101765400-101777200 Weak transcription Primary T cells fromperipheralblood blood
14 chr7:101765400-101780000 Weak transcription Small Intestine intestine
15 chr7:101765600-101773000 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr7:101765600-101783200 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr7:101765600-101801000 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr7:101765800-101783800 Weak transcription Primary B cells from peripheral blood blood
19 chr7:101766000-101773600 Strong transcription Dnd41 blood
20 chr7:101766000-101773800 Strong transcription Fetal Stomach stomach
21 chr7:101766000-101777000 Weak transcription Fetal Lung lung
22 chr7:101766000-101784600 Weak transcription HUVEC blood vessel
23 chr7:101766000-101796000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr7:101766000-101796000 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr7:101766000-101796000 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr7:101766200-101772400 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr7:101766200-101772600 Strong transcription Fetal Thymus thymus
28 chr7:101766200-101772800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr7:101766200-101773200 Weak transcription Psoas Muscle Psoas
30 chr7:101766200-101777200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr7:101766200-101777200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr7:101766200-101777600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr7:101766200-101779400 Weak transcription Colonic Mucosa Colon
34 chr7:101766200-101781000 Weak transcription Primary hematopoietic stem cells blood
35 chr7:101766200-101793800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr7:101766200-101796000 Weak transcription Esophagus oesophagus
37 chr7:101766200-101796600 Weak transcription Brain Germinal Matrix brain
38 chr7:101766400-101777000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr7:101766600-101774800 Strong transcription Fetal Intestine Small intestine
40 chr7:101766800-101773600 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr7:101767200-101772000 Strong transcription Primary T cells from cord blood blood
42 chr7:101767200-101772600 Strong transcription Thymus Thymus
43 chr7:101767200-101773200 Strong transcription Primary monocytes fromperipheralblood blood
44 chr7:101767400-101771800 Strong transcription Primary neutrophils fromperipheralblood blood
45 chr7:101767400-101773600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr7:101768000-101775400 Weak transcription HepG2 liver
47 chr7:101768000-101777600 Weak transcription Primary B cells from cord blood blood
48 chr7:101768000-101793800 Weak transcription K562 blood
49 chr7:101768800-101772400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr7:101768800-101772400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015