Variant report
| Variant | rs10265851 |
|---|---|
| Chromosome Location | chr7:104170503-104170504 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr7:104167917..104170559-chr7:104173438..104175788,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:18)
| rs_ID | r2[population] |
|---|---|
| rs10231685 | 0.94[CEU][hapmap] |
| rs10243072 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs10255304 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs10274079 | 1.00[CEU][hapmap] |
| rs1113933 | 1.00[JPT][hapmap] |
| rs12705234 | 1.00[JPT][hapmap] |
| rs12705239 | 1.00[JPT][hapmap] |
| rs12705240 | 1.00[JPT][hapmap] |
| rs12705241 | 1.00[JPT][hapmap] |
| rs12705242 | 1.00[JPT][hapmap] |
| rs12705243 | 1.00[JPT][hapmap] |
| rs13222581 | 1.00[JPT][hapmap] |
| rs13231181 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs13233643 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs13236834 | 1.00[JPT][hapmap] |
| rs17421686 | 1.00[ASN][1000 genomes] |
| rs35057092 | 1.00[ASN][1000 genomes] |
| rs67291877 | 1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv888925 | chr7:104047599-104170560 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
