Variant report

Variant	rs10266867
Chromosome Location	chr7:147200383-147200384
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs1018991	0.84[YRI][hapmap]
rs10236878	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap]
rs10236883	0.94[CEU][hapmap];0.86[CHB][hapmap];0.82[JPT][hapmap]
rs10242834	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10245813	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap]
rs10245926	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10258017	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10282302	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap]
rs11982152	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap]
rs12111800	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap]
rs12112731	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12113038	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap]
rs12671824	0.94[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap]
rs1528507	0.82[JPT][hapmap]
rs1528519	0.81[JPT][hapmap]
rs1528521	0.82[JPT][hapmap]
rs1534553	0.93[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16883526	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs16883529	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1830342	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1919190	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1919191	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2107855	0.94[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2107856	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2107857	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2141388	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2141389	1.00[CHB][hapmap];0.91[JPT][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2222764	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2373099	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap]
rs2373100	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap]
rs2888489	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2888490	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2888491	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4725739	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap]
rs4725740	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap]
rs4725743	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap]
rs4726875	0.82[JPT][hapmap]
rs4726877	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6956932	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6961608	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6973308	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.89[YRI][hapmap]
rs6978820	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7778685	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7782445	0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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