The 2.0 version of rSNPBase
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Variant report
Variant
rs10270888
Chromosome Location
chr7:104239096-104239097
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:1)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:1 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr7:104236957..104239098-chr7:104240637..104242974,2
K562
blood:
No data
No data
No data
No data
Extended variants information (count: 11 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:11)
rs_ID
r
2
[population]
rs10255159
0.90[YRI][hapmap]
rs10266389
1.00[AMR][1000 genomes]
rs10272959
1.00[YRI][hapmap]
rs12705235
0.87[YRI][hapmap];1.00[AMR][1000 genomes]
rs1465342
0.82[YRI][hapmap]
rs1468864
0.90[YRI][hapmap]
rs1548938
0.89[YRI][hapmap]
rs2193200
0.90[YRI][hapmap]
rs2385238
0.89[YRI][hapmap]
rs2385254
0.82[YRI][hapmap]
rs7801079
0.83[YRI][hapmap]
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links