Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:126307967..126309880-chr7:126404666..126406467,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1002366	0.81[CHD][hapmap];0.94[GIH][hapmap]
rs1002744	0.94[GIH][hapmap]
rs10216158	0.95[CHB][hapmap];1.00[JPT][hapmap]
rs10232001	0.82[JPT][hapmap]
rs10280247	0.82[JPT][hapmap]
rs10487458	0.90[CHB][hapmap];0.91[CHD][hapmap];0.87[JPT][hapmap]
rs10954138	0.82[CHB][hapmap]
rs12534101	0.81[CHB][hapmap]
rs1362001	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1946116	0.95[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap]
rs2074012	1.00[CEU][hapmap]
rs2237773	0.81[CHD][hapmap];0.94[GIH][hapmap]
rs2283070	0.81[CHB][hapmap]
rs2299513	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs2299514	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.84[MKK][hapmap];0.96[TSI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3808149	0.87[CEU][hapmap]
rs4728050	0.81[JPT][hapmap]
rs6467095	0.82[JPT][hapmap]
rs6467096	0.82[JPT][hapmap]
rs6467097	0.81[JPT][hapmap]
rs73228911	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7801141	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs9969183	0.83[ASW][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.93[MKK][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529300	chr7:125669493-126587858	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1032938	chr7:126067684-126587859	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv539119	chr7:126067684-126587859	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv889187	chr7:126219766-126478190	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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