Variant report

Variant rs10410198
Chromosome Location chr19:42781137-42781138
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:42774400-42783600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
2 chr19:42775400-42781400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
3 chr19:42775400-42781800 Weak transcription Small Intestine intestine
4 chr19:42775400-42782000 Genic enhancers Primary T cells fromperipheralblood blood
5 chr19:42775600-42781400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr19:42775800-42781600 Strong transcription Fetal Adrenal Gland Adrenal Gland
7 chr19:42775800-42781800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr19:42775800-42782400 Weak transcription Fetal Kidney kidney
9 chr19:42775800-42783600 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr19:42776000-42781200 Weak transcription Stomach Mucosa stomach
11 chr19:42776000-42781600 Weak transcription Primary hematopoietic stem cells blood
12 chr19:42776200-42781800 Strong transcription Fetal Thymus thymus
13 chr19:42776400-42781400 Genic enhancers Skeletal Muscle Male skeletal muscle
14 chr19:42776400-42782200 Genic enhancers Pancreas Pancrea
15 chr19:42777000-42782200 Genic enhancers Ganglion Eminence derived primary cultured neurospheres brain
16 chr19:42777200-42781400 Strong transcription HepG2 liver
17 chr19:42777400-42781400 Strong transcription Fetal Lung lung
18 chr19:42777600-42781200 Genic enhancers Liver Liver
19 chr19:42777800-42782000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr19:42778000-42781800 Genic enhancers Fetal Muscle Leg muscle
21 chr19:42778000-42783200 Genic enhancers Placenta Placenta
22 chr19:42778200-42781400 Genic enhancers Cortex derived primary cultured neurospheres brain
23 chr19:42778200-42783400 Genic enhancers Fetal Muscle Trunk muscle
24 chr19:42778400-42783400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr19:42778400-42783800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr19:42778600-42781800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr19:42778600-42782000 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr19:42778800-42781800 Genic enhancers Muscle Satellite Cultured Cells --
29 chr19:42778800-42781800 Genic enhancers NHEK skin
30 chr19:42778800-42782400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr19:42779000-42781200 Enhancers Primary T helper naive cells from peripheral blood blood
32 chr19:42779000-42781200 Enhancers Primary T killer naive cells fromperipheralblood blood
33 chr19:42779000-42781200 Genic enhancers Fetal Brain Male brain
34 chr19:42779000-42783400 Enhancers Primary T helper 17 cells PMA-I stimulated --
35 chr19:42779200-42781800 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr19:42779200-42782000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr19:42779200-42783400 Weak transcription H1 Cell Line embryonic stem cell
38 chr19:42779200-42783400 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr19:42779200-42783600 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr19:42779400-42781600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr19:42779400-42781800 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr19:42779400-42781800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr19:42779400-42781800 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr19:42779400-42782200 Weak transcription Ovary ovary
45 chr19:42779400-42782400 Genic enhancers Fetal Brain Female brain
46 chr19:42779400-42783200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr19:42779400-42783200 Enhancers Adipose Nuclei Adipose
48 chr19:42779400-42783400 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr19:42779400-42783400 Genic enhancers Primary hematopoietic stem cells short term culture blood
50 chr19:42779400-42783600 Weak transcription HUES48 Cell Line embryonic stem cell

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