Variant report

Variant rs10410698
Chromosome Location chr19:42783355-42783356
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:42774400-42783600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
2 chr19:42775800-42783600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr19:42778200-42783400 Genic enhancers Fetal Muscle Trunk muscle
4 chr19:42778400-42783400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr19:42778400-42783800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr19:42779000-42783400 Enhancers Primary T helper 17 cells PMA-I stimulated --
7 chr19:42779200-42783400 Weak transcription H1 Cell Line embryonic stem cell
8 chr19:42779200-42783400 Weak transcription HUES64 Cell Line embryonic stem cell
9 chr19:42779200-42783600 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr19:42779400-42783400 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr19:42779400-42783400 Genic enhancers Primary hematopoietic stem cells short term culture blood
12 chr19:42779400-42783600 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr19:42779400-42783800 Enhancers Right Atrium heart
14 chr19:42779600-42783400 Weak transcription H9 Cell Line embryonic stem cell
15 chr19:42779600-42783400 Enhancers Primary T helper cells fromperipheralblood blood
16 chr19:42779600-42783600 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr19:42780000-42783800 Enhancers Psoas Muscle Psoas
18 chr19:42780200-42783400 Enhancers Brain Angular Gyrus brain
19 chr19:42780400-42783400 Enhancers NHDF-Ad bronchial
20 chr19:42780400-42783600 Genic enhancers Fetal Stomach stomach
21 chr19:42780600-42783800 Enhancers Left Ventricle heart
22 chr19:42780600-42783800 Enhancers Placenta Amnion Placenta Amnion
23 chr19:42780800-42783400 Weak transcription Aorta Aorta
24 chr19:42780800-42783600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr19:42780800-42783600 Enhancers Esophagus oesophagus
26 chr19:42780800-42783600 Genic enhancers Fetal Intestine Small intestine
27 chr19:42780800-42783600 Enhancers Osteobl bone
28 chr19:42781000-42783600 Enhancers NH-A brain
29 chr19:42781200-42783400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr19:42781200-42783400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
31 chr19:42781200-42783400 Enhancers Brain Substantia Nigra brain
32 chr19:42781200-42783600 Enhancers Colonic Mucosa Colon
33 chr19:42781200-42783600 Enhancers Fetal Brain Male brain
34 chr19:42781200-42783600 Enhancers Gastric stomach
35 chr19:42781200-42783600 Enhancers Rectal Mucosa Donor 29 rectum
36 chr19:42781200-42783800 Enhancers Liver Liver
37 chr19:42781200-42783800 Enhancers Stomach Mucosa stomach
38 chr19:42781600-42783400 Enhancers Brain Cingulate Gyrus brain
39 chr19:42781600-42783400 Genic enhancers Fetal Adrenal Gland Adrenal Gland
40 chr19:42781600-42783400 Enhancers HepG2 liver
41 chr19:42781600-42783600 Enhancers Primary hematopoietic stem cells blood
42 chr19:42781800-42783400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr19:42781800-42783400 Flanking Active TSS HSMM muscle
44 chr19:42781800-42783600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr19:42781800-42783600 Enhancers Fetal Lung lung
46 chr19:42781800-42783600 Genic enhancers NHLF lung
47 chr19:42781800-42783800 Enhancers Rectal Mucosa Donor 31 rectum
48 chr19:42781800-42783800 Transcr. at gene 5' and 3' NHEK skin
49 chr19:42781800-42784000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr19:42781800-42784000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin

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