Variant report

Variant rs10411908
Chromosome Location chr19:42783666-42783667
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:42778400-42783800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr19:42779400-42783800 Enhancers Right Atrium heart
3 chr19:42780000-42783800 Enhancers Psoas Muscle Psoas
4 chr19:42780600-42783800 Enhancers Left Ventricle heart
5 chr19:42780600-42783800 Enhancers Placenta Amnion Placenta Amnion
6 chr19:42781200-42783800 Enhancers Liver Liver
7 chr19:42781200-42783800 Enhancers Stomach Mucosa stomach
8 chr19:42781800-42783800 Enhancers Rectal Mucosa Donor 31 rectum
9 chr19:42781800-42783800 Transcr. at gene 5' and 3' NHEK skin
10 chr19:42781800-42784000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr19:42781800-42784000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
12 chr19:42781800-42784000 Enhancers Lung lung
13 chr19:42781800-42784000 Enhancers Small Intestine intestine
14 chr19:42781800-42784000 Flanking Active TSS Stomach Smooth Muscle stomach
15 chr19:42781800-42784000 Flanking Active TSS HSMMtube muscle
16 chr19:42781800-42784200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
17 chr19:42782000-42783800 Enhancers Primary T cells fromperipheralblood blood
18 chr19:42782000-42784000 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
19 chr19:42782000-42784200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
20 chr19:42782200-42783800 Enhancers Primary B cells from peripheral blood blood
21 chr19:42782400-42783800 Enhancers Primary B cells from cord blood blood
22 chr19:42782400-42783800 Enhancers Primary mononuclear cells fromperipheralblood Blood
23 chr19:42782400-42784000 Enhancers Sigmoid Colon Sigmoid Colon
24 chr19:42782400-42784000 Enhancers Spleen Spleen
25 chr19:42782400-42784000 Flanking Active TSS HMEC breast
26 chr19:42782600-42783800 Enhancers Primary T helper naive cells from peripheral blood blood
27 chr19:42782600-42783800 Enhancers Primary T killer naive cells fromperipheralblood blood
28 chr19:42782600-42784000 Flanking Active TSS Rectal Smooth Muscle rectum
29 chr19:42782800-42783800 Enhancers HUVEC blood vessel
30 chr19:42782800-42784000 Flanking Active TSS Brain Germinal Matrix brain
31 chr19:42782800-42784000 Flanking Active TSS Fetal Brain Female brain
32 chr19:42783000-42783800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr19:42783000-42783800 Enhancers Primary monocytes fromperipheralblood blood
34 chr19:42783000-42783800 Enhancers Primary T cells from cord blood blood
35 chr19:42783000-42784000 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
36 chr19:42783000-42784000 Flanking Active TSS Dnd41 blood
37 chr19:42783000-42784000 Flanking Active TSS GM12878-XiMat blood
38 chr19:42783000-42784000 Flanking Active TSS Hela-S3 cervix
39 chr19:42783000-42784200 Flanking Active TSS Duodenum Mucosa Duodenum
40 chr19:42783200-42783800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr19:42783200-42783800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
42 chr19:42783200-42783800 Enhancers Placenta Placenta
43 chr19:42783200-42784000 Flanking Active TSS Brain Anterior Caudate brain
44 chr19:42783200-42784200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr19:42783200-42784200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
46 chr19:42783200-42784600 Flanking Active TSS Adipose Nuclei Adipose
47 chr19:42783200-42784800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
48 chr19:42783400-42783800 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr19:42783400-42783800 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr19:42783400-42783800 Enhancers iPS-15b Cell Line embryonic stem cell

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